| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3721 |
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| Symbol | |
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| ID | 3625011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4799988 |
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| End bp | 4801649 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702554 |
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| Product | sodium:proline symporter (proline permease) |
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| Protein accession | YP_307164 |
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| Protein GI | 73671149 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA GTACTTCAAC TCTAATCCTC CTTGTCATTA TTTACTTTAT GTGCACCTTC
TACGTTGCCC GACTGGGGTA TAAGAAAAAT TCCCAGACCG ATGATGGGTA TATGCTTGCA
GGCCGACGTG TACCCCCGGC AATTATGGCT CTCTCCTACG GAGCTGCGTT CATCAGCACT
TCTGCAATTA TAGGATTTGG AGGAGTAGCC GCTTCCTCAG GAATGGGGCT TCTGTGGCTT
GTCTTTATGA ATATCTTTTT CGGAATTTTC ATTGCCTTCG TGATTTTTGG CCCAGGAACC
CGGCGCATGG GGCTAAACCT TGGAGCCATT ACTTACCCTG AATTCATAGG AAAACGTTTC
CAATCAAGAT TTATTCAAGC ATTTTCCGGT CTCCTTATAG CGGTCTTCAT GCCTCTTTAT
GCTGCAAGCG TGATCATAGG AGCAGGCAGA TTTCTTGAAA CCACGCTTGC GATAAACTAT
AATGTCGCTC TTTTGATCTT TATCGTCATC ATTGCTTTTT ATGTAATTAA AGGCGGCCTC
CTCTCAGTAA TGTACGTGGA TGCAATGCAA GCCACTATCA TGCTGATAGG AATGACCTTT
TTGCTGGTAT ATACCTACAG TAAACTGGGA GGAGTCGTAG AAGCCCACCA GGCTCTTACC
AATATGGCAA ACCTTGTGCC TCAGGCGCTT GTTGACCAGG GTCACAGGGG CTGGACTTCA
ATGCCAGCTT TTAATTCCTC AATCTGGTGG ACAATGGTTT CCACAATTGT TATGGGGGTA
GGGATAGGAG CACTTGCACA GCCACAGCTT GCAGTCAGGT TCATGACTGT AAAGGACGAC
CGTTCCTTGA AAAGAGCAGT TGCTGTGGGA GGTCCCTTCC TTCTTATGAT GGCAGGAGTT
ACATATGTTG TGGGAGCACT TTCTAATGTA TACTTTTACA GAACTACAGG AATGATCGCC
ACTCAGTTTG TCCCGGGTGG AAACACCGAC CTTATAATTC CCGCATACCT GAACCACGCA
ATGCCCGCGC TGTTTGTGGC AATATTCATG CTAAGCCTGC TTTCGGCAGC AATGTCTACT
GCAGCTGCCC AGTTCCACAC CATGGGTACA GCCATAGGAT ATGACTTTTA CCAGCACGGC
CTTATGAAAG GCAAGTCAAG TTCGAGCACG GTTCATGTTA CAAAAATAGG AATTGCCTTT
ACCATCGTGG TAGCAGTTAT TCTGGCTTAC GTTCTTCCTG GAAGTATTAT CGCAAGAACT
ACTGCCATGT TCATGGGACT GTGCACATCC GCTTTCCTGC CTCTCTATAT TGGAGCGCTG
TTCTGGAAAC GCACAACGAA AGCCGGAGCA ACTGCAAGTC TTGTTATAGG ATCGATAAGC
AGTCTTTTCT GGCTGGTCTT TGTCCATGCA AAAGAAGCAG TGTCTCTAGG AATCTGCCAG
GCAATCTTTG GAAAAGAAAC TTTACTTACA GGCACCTGGC CCCTTGTAGA TCCAATCATG
ATCGCAACTC CACTGTCTTT CCTTGTCCTG ATTGTAGTAA GCCTTATGAC ACCCCGTTTC
TCTCCAGAGT TTCTCAAAAA GGCTTTCAGG CTCAGGTTTG AAGATGAAGA CGAAGCATCG
GAAGCAACAT CAAACAGTGT AGCGGATTCG ACAGGCGTTT AA
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| Protein sequence | MAVSTSTLIL LVIIYFMCTF YVARLGYKKN SQTDDGYMLA GRRVPPAIMA LSYGAAFIST
SAIIGFGGVA ASSGMGLLWL VFMNIFFGIF IAFVIFGPGT RRMGLNLGAI TYPEFIGKRF
QSRFIQAFSG LLIAVFMPLY AASVIIGAGR FLETTLAINY NVALLIFIVI IAFYVIKGGL
LSVMYVDAMQ ATIMLIGMTF LLVYTYSKLG GVVEAHQALT NMANLVPQAL VDQGHRGWTS
MPAFNSSIWW TMVSTIVMGV GIGALAQPQL AVRFMTVKDD RSLKRAVAVG GPFLLMMAGV
TYVVGALSNV YFYRTTGMIA TQFVPGGNTD LIIPAYLNHA MPALFVAIFM LSLLSAAMST
AAAQFHTMGT AIGYDFYQHG LMKGKSSSST VHVTKIGIAF TIVVAVILAY VLPGSIIART
TAMFMGLCTS AFLPLYIGAL FWKRTTKAGA TASLVIGSIS SLFWLVFVHA KEAVSLGICQ
AIFGKETLLT GTWPLVDPIM IATPLSFLVL IVVSLMTPRF SPEFLKKAFR LRFEDEDEAS
EATSNSVADS TGV
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