| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3694 |
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| Symbol | |
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| ID | 3624638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4757367 |
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| End bp | 4758962 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702526 |
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| Product | DNA-directed RNA polymerase subunit beta'' |
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| Protein accession | YP_307137 |
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| Protein GI | 73671122 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.507465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCACC ATATAGACTC GTTTAACAAG TTTATAGACT ACGGGCTGCA AAAAATCATA
GATGAACAGA AAATAATAGA AACCGATATC GAGGATACCT ACCTCAAACT TGGAAAAATT
CGGGTAGAGC ATCCTGTGGT AAAGGAAGCT GACGGGGCAA TCGAAAAACT TTATCCCAAC
GAGGCAAGGC TCAGGAACCT CTCATACTCA GGCCCTCTCT ACCTCGAAAT GAGCGTGGTA
AAAGAGGGAA TTGAGTCCGA ACCAATGGAA GCAAAAATAG GACAGCTCCC TATAATGGTC
AAATCTAAGA TCTGTAACCT TCCAGGACTT AGCGAAACCG AAAAAGTTCG CTATGGGGAA
GATCCACTTG ACCCTGGGGG ATATTTCATT ATCGGCGGCA CCGAAAGGGT GGTTATGACC
CTAGAAGATC TCGCTCCTAA CAAAATTCTT GTAGAGTATG GGGAGAGGTA CGGCGACACT
ATAGAAGTTG CAAAGGTTTT CTCACAGAAA CGCGGATACA GAGCTCTAGT AATCGTAGAA
AGAGGAAGAA AGTCTCTGCT CGAGGTTTCT TTCCCGTCGA TTTCAGGCCG AGTATTCTTC
ATTACTCTTA TGAGAGCTCT TGGGATTGTA ACTGACGAAG ATATTGTAAA TGCAGTTTCA
AGTGATCCCG AAATTATAAA GTTCATGCTG GAAAACCTTG AAGAAGCCGA AGTCGAAACC
CAGGACGAAG CAATCGAGAA AATCGGGGCC CGGGTCGCTG CAGGCCAGGC TAAGGAATAC
CAGATAAAAA GAGCAAACTA TGTTATTGAC AGGTACCTGT TTCCCCATCT TGGAAACGAC
ATGAAAGACA GAATCTCCAA GGCTCACTTC CTGGCAAGAA TGGCTGAGTC CTGTTTCGAG
CTGGCCCTGG GCAAGCGTTC GGAAGATGAT AAAGACCACT ATGCAAACAA AAGACTGAAA
CTAGCTGGAG ACCTGATGGA AGACCTCTTC AGGGTATCTT TCAACAGGCT TGCAAGAGAC
ATAAAATACC AGCTCGAACG CGCAAACATG AGAAACAGGG AGTTAAATGT CGCAACAATA
GTCAGGGCCG ATGTGTTAAC TGACCGCCTG CAGCACCCAC TGGCAACTGG AAACTGGGTT
GGAGGAAGAA CAGGTGTGTC CCAACTCCTT GACAGAAACG ACTATATCTC CACGCTTTCT
CATCTGCGCC GGGTAATTTC ACCTCTTTCA CGAGCTCAGC CTCACTTTGA GGCCCGAGAC
CTGCATGCAA CCCAGTGGGG AAGGCTTTGC CCTTCGGAAA CTCCTGAAGG TCCAAACTGT
GGTCTGGTGA AAAACTTTGC CGAGATGGTT GAACTTTCAA CAGGTATAGA AGATATCGAT
GGGATTAAGA AAATCCTCCA TGACCTGAAC GTCGAGCGCG TGGTTGTAAA GGTACCGGAA
CTCCCGTCCA AAATGAAAGA AACATTACTT GATGAGTTCG GAGAAGAGAT TGTTGAAGAA
TACGAAGAGC CTTCGGAAAG CGAAAGCAAA TTCAAAGATG ATGAGTTTTA CGATTACTCA
GATATGGACG ATTCCGGATC AATGTTCGGT GATTGA
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| Protein sequence | MQHHIDSFNK FIDYGLQKII DEQKIIETDI EDTYLKLGKI RVEHPVVKEA DGAIEKLYPN
EARLRNLSYS GPLYLEMSVV KEGIESEPME AKIGQLPIMV KSKICNLPGL SETEKVRYGE
DPLDPGGYFI IGGTERVVMT LEDLAPNKIL VEYGERYGDT IEVAKVFSQK RGYRALVIVE
RGRKSLLEVS FPSISGRVFF ITLMRALGIV TDEDIVNAVS SDPEIIKFML ENLEEAEVET
QDEAIEKIGA RVAAGQAKEY QIKRANYVID RYLFPHLGND MKDRISKAHF LARMAESCFE
LALGKRSEDD KDHYANKRLK LAGDLMEDLF RVSFNRLARD IKYQLERANM RNRELNVATI
VRADVLTDRL QHPLATGNWV GGRTGVSQLL DRNDYISTLS HLRRVISPLS RAQPHFEARD
LHATQWGRLC PSETPEGPNC GLVKNFAEMV ELSTGIEDID GIKKILHDLN VERVVVKVPE
LPSKMKETLL DEFGEEIVEE YEEPSESESK FKDDEFYDYS DMDDSGSMFG D
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