| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3693 |
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| Symbol | |
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| ID | 3624637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4755538 |
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| End bp | 4757352 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637702525 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_307136 |
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| Protein GI | 73671121 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.256816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAG CAAAAGTATT CATAAACGGG GAGCTTGTCG GGACCCACGA TAACCCTGCG
GAGCTTGTAG ACGAGCTCAG AAAGATGAGG CGGCAGGGTT TCATATCCAG ACAGGTTAAT
GTCGCTCTTA ATAGCAACAC AAGAGAAGTA ATTATAAACT CCGATATGGG CCGAGCAAGA
AGGCCACTTA TAGTTGTGGA GAACGGAGCT CCCAGGGTAA CCGAAGAGCA CGTAGAGAAA
ATTAAGAACA AGGAAATCAC CTTTGATGAC CTGGTAAAAG AAGGCTGTAT AGAGTATCTC
GATGCCGAAG AAGAAGAAAA CGCCTACATC GCACTCTATG AAGCTGACCT TAATTCAAAG
CACACTCACA TGGAGATTGA TCCTGAACTT ATTCTTGGGA TCTCTACGGG AATGGTGCCT
TATCCTGAAC ATAATGCATC TCCGCGTAAC ACCATGGGTG CAGCCATGAT CAAACAGTGT
ATTGGGGTTG CAACCGCAAA CCAGAAGCTC AGACCTGATA CCCGGGCCCA TGTCCTTCAC
TACCCTCAGA GGGCAATGAC CAGAACCAGA ACCTCGGAAG CAATAGGTTT TGACGACAGA
CCTGCGGGAC AGAACTTCGT GGTCGCGATT CTCTCTTATG AAGGGTATAA TATTGAAGAT
GCCCTGATTT TCAATAAAGG CTCAATTGAA AGAGGCCTCG GGAGAAGTCA CTTTCTCAGA
ACTTTCGAAG GGGAAGAACG AAGGTATCCG GGTGGACAGG AAGATAAGTT CGAGATTCCT
GACTCCGAAT ACCGTGGAGC GCGTAGTGCA GAAGCCTATG CAAACCTGGA TACAGACGGG
CTTGTAAATC CCGAAACCCC GGTTGGCCCC AATGATGTAC TTATCGGAAA AACCAGTCCA
CCAAGGTTCC TTGAAGAACC GTCAGACTTC GGGATTTCAG TCGAGCAGAG GAGAGAAAGC
TCGATCACAA TGCGGTCAAA TGAAACCGGA ATTGTTGACA CTGTAATTCT GACCGAATCC
ATTAATGGAA CCAGGCTTGC CAAAGTAAAG GTAAGAGATG AAAGGATTCC TGACATAGGG
GACAAATTCG CTTCAAGGCA TGGGCAAAAA GGAGTTATCG GCCTGAAAGT CCCGATTGCA
GATATGCCGT TTACGGAATC CGGCCTGACT CCGGACCTGA TGATCAACCC ACATGCAATT
CCTTCCCGTA TGACTGTAGG TCACGTCCTG GAAATGATTG GCGGAAAGGT AGGTTCCATG
GAAGGCAGAC GAGTTAATGC AACAGCTTTC TCAGGAGAAA ACGAAGAAGA CCTCAGAGAA
GCTCTGAAGA GGCATGGGTT TGCTCATACC GGAAAAGAGG TCTTCTACGA CGGAGCTACC
GGCAAGATGA TCCCTGCAGA TGTCTTTGTT GGGGTTATTC TCTACCAGAA ACTGCACCAC
ATGGTCACTT CGAAGATGCA CGCACGGTCT CGTGGGCCTG TACAGGTACT TACCCGCCAG
CCAACCGAAG GCCGAGCCAG AGAAGGTGGT CTCAGATTCG GAGAAATGGA GCGTGATGTG
CTGGTAGGAC ACGGAGCTGC CATGTCGCTA AAAGAGAGGC TGCTCGACGA GTCAGATAAG
GTTGTTGAAC TTGTCTGTTC TCACTGTGGA ATGATTGCAA CGTATGACAA GCAGCGAAAT
GTCGCTTTCT GCTCAACCTG CGGGGCTGAC ACGGATATAT ACCCAGTGGA GATGAGCTAT
GCATTCAAGC TGCTGCTGGA CGAAATCAAA TCCCTGGGAG TTGCGCCCAG GCTTAAACTT
GAAGATGCGG TATGA
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| Protein sequence | MTKAKVFING ELVGTHDNPA ELVDELRKMR RQGFISRQVN VALNSNTREV IINSDMGRAR
RPLIVVENGA PRVTEEHVEK IKNKEITFDD LVKEGCIEYL DAEEEENAYI ALYEADLNSK
HTHMEIDPEL ILGISTGMVP YPEHNASPRN TMGAAMIKQC IGVATANQKL RPDTRAHVLH
YPQRAMTRTR TSEAIGFDDR PAGQNFVVAI LSYEGYNIED ALIFNKGSIE RGLGRSHFLR
TFEGEERRYP GGQEDKFEIP DSEYRGARSA EAYANLDTDG LVNPETPVGP NDVLIGKTSP
PRFLEEPSDF GISVEQRRES SITMRSNETG IVDTVILTES INGTRLAKVK VRDERIPDIG
DKFASRHGQK GVIGLKVPIA DMPFTESGLT PDLMINPHAI PSRMTVGHVL EMIGGKVGSM
EGRRVNATAF SGENEEDLRE ALKRHGFAHT GKEVFYDGAT GKMIPADVFV GVILYQKLHH
MVTSKMHARS RGPVQVLTRQ PTEGRAREGG LRFGEMERDV LVGHGAAMSL KERLLDESDK
VVELVCSHCG MIATYDKQRN VAFCSTCGAD TDIYPVEMSY AFKLLLDEIK SLGVAPRLKL
EDAV
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