Gene Mbar_A3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3613 
SymbolileS 
ID3626315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4639580 
End bp4642756 
Gene Length3177 bp 
Protein Length1058 aa 
Translation table11 
GC content48% 
IMG OID637702443 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_307058 
Protein GI73671043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAG AAATCACTGC TAAGTATAAC GCAGAGCAAA TTGAAAAAAA GATAACACAG 
CTCTGGAAAG ATAGCGATGC TTATCGAAAA ACCCGAGAGC ACCGCAAGAC TGGAAAAAGA
CTTTTTTTTG TTGACGGCCC CCCGTATACG ACCGGACATA TCCACCTGGG AACTGCCTGG
AATAAGATCA TTAAAGATTC CATTCTTCGC TATTATTCTA TGAATAACCG TAATATTCTC
GAGCGCCCTG GCTGGGATAT GCATGGTCTG CCGATTGAAG TCAAAGTTGA GGGCGTGCTC
GGTTTCAAAT CCAAAAAGGA CATTGAGAGC TTTGGAGTAG AGAATTTTAT CGAGAAATGT
AAGGAATTTG CTATCAACCA GAAGCAGGAA ATGACTGAAC AATTCCAGAG GCTAGGGGTC
TGGATGCAAT GGGAAGCCCC CTACATGACC TTAAAAGACG ATTACATTGA AGCTGCCTGG
TGGACTCTCA AGCAAGCCAG TGAAAAAAAC CTGCTGGATG TGGGCAAACG TTCAGTCAAC
TGGTGCCCTC GCTGTGAGAC TGCAATTGCG GACTCAGAGG TTGAATATGC CGAGAGGACC
GATCCTTCAA TTTATGTAAA ATTTAAGATC AAAGGCGAGG AAAATACCTT CATAGTCATC
TGGACAACAA CCCCCTGGAC AATTCCCGCA AATGTAGCTG TAGCTGTACA TCCTGGTTTT
GAATACTCGA AATTCAGGGC AATCAGGCAG GATGGCTCTG ATGAGATCTT GATTGCAGCT
ACCGACCTGA TCGAGAACGT CCTTAGACAG GGCAGGTATG TTGACTACGA AGTACTTGAG
ACAATGCTCG GGGAAGACCT GACGAAACTT GAGTACGAAA GCCCTGTTGG GGATCTTGTG
CCTGTGCAGA ATGAGATAAA GCATGGCATT TATCTTGCCG ATTACGTAAC TGCAGAAAAC
ACAGGCTGTG TACATATTGC CCCAGGACAT GGTATGGACG ACTTTAACGT TGGCGTGAAG
TATAACCTTC CAATCCTCTG TCCTGTGGGC CCGAACGGTG CTTATACTGA AGAAGCCGGG
GAATATGCGG GCAAAAACGT CAGGGAAGCA AACCCGATTG TTATTGAAGA CCTGAGGAAA
CGTAACAGGC TGCTTGCAGA AGGAACTGTT ACGCACAGGT ACGGGCACTG CTGGCGCTGC
AAAACTCCTA TAATCTATCT TGCAACCGAG CAGTGGTTCC TCAAGGTTAC AGATATAAAG
GACAAAATGC TTGAGGCAAT TGATGCCGTA GACTGGTACC CTGAATGGGC AGGTTCAGCC
AGGTTCAGGA CCTGGGTTGA AGGTGCCCGA GACTGGTGTA TTTCCAGGCA GCGCTACTGG
GGAATGCCAA TTCCGGTCTG GAAGTGTAAG AAATGTGGAA AACTTGAGGT AATAGGAACC
AAAGCCGAAC TGCTGGAAAA ATCCGGAGCA GGCAGTGATG TCGAACTTCA CCGCCCCTAT
GTGGACAAAC TAACTATTCC CTGTGAGTGC GGCGGAGAGA AAAAACGTGT TGAGGACGTT
TTCGATGTCT GGTTTGATTC GGCTGTCGCT TCCTGGGCTA CTCTGAAGTT CCCGCAGACC
AGGGAACAGT TTGACGAATG GTGGCCTGCT GACTTTATTA CTGAAGGGCA TGACCAGACA
CGCGGCTGGT TCTATTCACA GCTTGGAGCA AGCATGGTGG GCTTCGGACG AGCTCCTTAC
AAGAGTGTGC TCATGCACGG CTTTACGCTT GATGCAGGTG GAAAGAAAAT GTCCAAAAGC
CTTGGAAACG TGGTTTCCCC GATTGATGTA ATCGACAAGT ATGGGGCTGA CACTCTGCGT
GCCTATGTGC TTTCCTCAAG TGCGCCCTGG GATGACCTTA AGTTCAACCA GGAAGAAGTG
GAAAACGTCC ATCGTTCAAT CAATATTCTC TGGAACGTTT TCAGGTTCCC GCTGCCTTAT
ATGGCACTCG ATAATTTTGA TCCTCTTAAG GTCAGCCTTG ATTCCGTAAA AGACGCGCTC
AGGGAAGAGG ACAGGTGGAT TCTCTCAAGA ATTCAGTCTG TTGTTAAGGC TGTAGACGAA
GCAATGAGCG GGTACTTCCT ACATAAAGCA GTGCGTGAGA TTCTTGAATT TACTCTGGAA
GACCTCTCCC GCTGGTATAT CCAGCTTATC CGTCCGAGAA CCTGGACCGA AGCCGACGAT
CCTGACAAGC TTGCAGCTTA CCGTGTGCTT TATGAAGTCT ACGTAACCCT TACAAAATTG
ATCTCTCCTT TCATGCCTTA CTTGGCTGAA GAGATGTATC AGAACCTTAT AAGAAATGTA
GACCCGAATG CACTGGAATC AGTTCATATG TGCGATTGGC CAAAAGTCAA TGAAGCCTAT
CTTGACCCTG AACTCGAAGC GGCCATGAGC ACTGCACGTT CTATCGTGGA AGCCGCTTCA
AACGCCCGCC AGAAGGCAGG ACGAAAGCTC AGGTGGCCCG TTTCCCGAAT AGTTGTTTCC
CCTGAAAGTG AGGACGCAGC AAAGGCTGTA GAGAGACTGC GCTCAGTCCT TATGGACCAG
ACAAATTCCA AGGCAATTGT CCTGACGCCC GTTGGTGAGA GCTGGGATGA ACTTGGGCTT
GAAGTAATCC CTGATCCAAG TAAAATAGGC CCTGTATTTA AGAAGGATGC AGGAAAAGTC
ATTCCTGCCC TGCAAAAGGT TGACGGTTTT GCTTTGAAAA AAGCCTTTGC CGAGGCTGGC
GAGTTTGAGC TCTCCCTTGC AGACAGAACA ACGGTTACAG TCACTCCTGG TATGGCAAAC
TTCAAAGAAA CCCTGCCAGA AGGTACAGCA AGTGCAGAAT CCGATGCTGG TCTTGTCTAT
GTGGACGCAA ATCTGACTCC AGAACTGGAA GCTGAAGGGT ATGCAAGGGA AGTAATTCGC
AGGCTTCAGG ACATGCGGAA GGAGCTTGAC CTTGTGGTGG ACGAAAACAT CCGCGTCTCA
GTCCGGATCG AAGATGAAAG AGTCCTGAGA CTTGTTGAAA CACTCAAGGA TCTGATTGCA
GAAGAGGTAA GAGCCGAGAT CCTTAACCTT GGCAGTGATA TCGATGTTTC CGGAGCCCTT
GTAAAGGATT GGGATGTTGA AGGCATTGCC ATGAAGATGG GTATTTCAAA GAAATAA
 
Protein sequence
MIKEITAKYN AEQIEKKITQ LWKDSDAYRK TREHRKTGKR LFFVDGPPYT TGHIHLGTAW 
NKIIKDSILR YYSMNNRNIL ERPGWDMHGL PIEVKVEGVL GFKSKKDIES FGVENFIEKC
KEFAINQKQE MTEQFQRLGV WMQWEAPYMT LKDDYIEAAW WTLKQASEKN LLDVGKRSVN
WCPRCETAIA DSEVEYAERT DPSIYVKFKI KGEENTFIVI WTTTPWTIPA NVAVAVHPGF
EYSKFRAIRQ DGSDEILIAA TDLIENVLRQ GRYVDYEVLE TMLGEDLTKL EYESPVGDLV
PVQNEIKHGI YLADYVTAEN TGCVHIAPGH GMDDFNVGVK YNLPILCPVG PNGAYTEEAG
EYAGKNVREA NPIVIEDLRK RNRLLAEGTV THRYGHCWRC KTPIIYLATE QWFLKVTDIK
DKMLEAIDAV DWYPEWAGSA RFRTWVEGAR DWCISRQRYW GMPIPVWKCK KCGKLEVIGT
KAELLEKSGA GSDVELHRPY VDKLTIPCEC GGEKKRVEDV FDVWFDSAVA SWATLKFPQT
REQFDEWWPA DFITEGHDQT RGWFYSQLGA SMVGFGRAPY KSVLMHGFTL DAGGKKMSKS
LGNVVSPIDV IDKYGADTLR AYVLSSSAPW DDLKFNQEEV ENVHRSINIL WNVFRFPLPY
MALDNFDPLK VSLDSVKDAL REEDRWILSR IQSVVKAVDE AMSGYFLHKA VREILEFTLE
DLSRWYIQLI RPRTWTEADD PDKLAAYRVL YEVYVTLTKL ISPFMPYLAE EMYQNLIRNV
DPNALESVHM CDWPKVNEAY LDPELEAAMS TARSIVEAAS NARQKAGRKL RWPVSRIVVS
PESEDAAKAV ERLRSVLMDQ TNSKAIVLTP VGESWDELGL EVIPDPSKIG PVFKKDAGKV
IPALQKVDGF ALKKAFAEAG EFELSLADRT TVTVTPGMAN FKETLPEGTA SAESDAGLVY
VDANLTPELE AEGYAREVIR RLQDMRKELD LVVDENIRVS VRIEDERVLR LVETLKDLIA
EEVRAEILNL GSDIDVSGAL VKDWDVEGIA MKMGISKK