| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3603 |
|---|
| Symbol | |
|---|
| ID | 3626747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4622941 |
|---|
| End bp | 4623681 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637702436 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_307051 |
|---|
| Protein GI | 73671036 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.879922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0916284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAG AAAGTAGAAA TAAGATGGAA AAAACGCATA CGAAGCCAAA GAATGTCTGG
GAAGGCTTTT TTAAGGATAA GACACACGGA GGCCATAGAT ATTCATCTGA GGAGTTTCTT
GCTATGGAAG CAAGGGAAAA ACTATTTCAC CTTGAAGGAG GCAAAACACT GCTTGACTTC
GGGTGTGGCT CTGCAGAACT CCTGACTTAC TATGCTCCTG AATATGAACA GCTTTTAGGA
GTAGATTTTT CCCCGTCCAT GCTTGGAGAA GCAAGTAAGA GGATCAGTGA AAGAAAATGT
AATAATATTG ACCTTATACT TGCTGACCAT GAAACACTCT GGGAAAACCT GGACTCAAAT
TTTGATCGAA TAACTGCAGC TGGAGTAGTC CAATACTTAA CGTTTCAAGA AATTGATGAC
TTTATTGCTA AGTCATCAGA ATATCTCAGT ACAGGCGGTA AAATAGTATT TTTTGACATA
CTGGATCCAC GCCTATACCC ATTGTGGAAA CTAGGAGTAT TTGCGCCGAA TGCAGGGCTT
TTAAAAGCTT TATACAGGGT AGGTTGCGAT TTTCAGACTT CAGTTCTGGC AACTTTAAAA
AACCGTCCGA GAAACATTTA TGGTTTTACC CATAATCCTT ATAAAATCCA GAAAATTGCA
AACAAAAACG GCTTTGAGAT GCGCTATGTA CAATCAATGT ACTACGAATA TAAGTATCAT
GCAATAATGT TTCGAACTTA A
|
|---|
| Protein sequence | MEVESRNKME KTHTKPKNVW EGFFKDKTHG GHRYSSEEFL AMEAREKLFH LEGGKTLLDF
GCGSAELLTY YAPEYEQLLG VDFSPSMLGE ASKRISERKC NNIDLILADH ETLWENLDSN
FDRITAAGVV QYLTFQEIDD FIAKSSEYLS TGGKIVFFDI LDPRLYPLWK LGVFAPNAGL
LKALYRVGCD FQTSVLATLK NRPRNIYGFT HNPYKIQKIA NKNGFEMRYV QSMYYEYKYH
AIMFRT
|
|---|
| |