| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3602 |
|---|
| Symbol | |
|---|
| ID | 3626746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4621670 |
|---|
| End bp | 4622707 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637702435 |
|---|
| Product | formate acetyltransferase activating enzyme |
|---|
| Protein accession | YP_307050 |
|---|
| Protein GI | 73671035 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.795374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.163348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCT TTTTTAAGAT AACCGAAAGA ATTCCAGTCC AGTTTGATCC AGGCATGAAG
CTTGAAGAGC TCAGGAAAAT TCATAGTAAT GAGCTTGAAG AGTACCGAAA AATCAAAGAA
GACCTTGAAC TAGAAGCCGC TGAAGCCCTT GGCTATAAAG ATGAAAATGA CAGGCTGGCA
TTTTTTACCA AAAACTTCCT GGAACTTCCA AAAGCCAGCC CCTCTCTTCT TGACCTTAAG
GTCGAGATTA CGGACAGAAT GCTTTCGAAC TGCCAGTGCT GCGGGTGGCG CTGTGAAGTT
GACAGGAAAG CCGGTGAAAA AGGCTTCTGC AGACTAGCCG ACACTTCCAA TTACGCTTCT
GAGTTCCTGC ACATGGGAGA GGAGCCTGAG CTTGTGCCTT CTCATACGAT TTTTCTTACA
GGTTGTGCTT TTGCCTGCGT TTACTGCCAG AATTGGGATA TCTCAACTAA TCCTGAATCT
GGGACTCGGA TCGAACCCAG GAAACTTGCA AAGCTTATCG ACCTTCGGAG AATGCACGGG
GCCAGAAACG TGAATTTCGT TACCCCGACT CCGCATGCGC ATACCGTCCT GAAGATAGTC
CGGGAAATCT CTGTAAACAC TCCTGTGATC TGGAACTCAA ATATGTATCA TTCTCCAGAA
GTTGCAGAGA TCCTTGAAGG GGTTGTGGAT GTTTACCTGG GAGATTTTAA GTACGGAAAC
AATGCATGCG CCCGGAAATA TTCAAAAATA AAAAATTACC TGGAAATCGT GCAGCCCAAT
TTTGAATTTG CTTACGCAAC CGCAGAAGTC CTCCTTCGAC ACCTGGTCCT TCCGGGCCAC
CTGGAATGTT GCACAAGACC TATTGCCGAA TGGGTTGCAA AACATATTCC GCAAATAAGA
TTTAACCTCA TGTTCCAGTA CAGACCGTGC TACCGGGCTA TGGAATATCC AGAGATTGGA
CGCCGCCTGA CTCCGGAAGA AGAGACTAAA GCGATCGAGA TTGTAAAAGA GGAAGGGATT
GAAGATTTAC TGGTCTGA
|
|---|
| Protein sequence | MPAFFKITER IPVQFDPGMK LEELRKIHSN ELEEYRKIKE DLELEAAEAL GYKDENDRLA
FFTKNFLELP KASPSLLDLK VEITDRMLSN CQCCGWRCEV DRKAGEKGFC RLADTSNYAS
EFLHMGEEPE LVPSHTIFLT GCAFACVYCQ NWDISTNPES GTRIEPRKLA KLIDLRRMHG
ARNVNFVTPT PHAHTVLKIV REISVNTPVI WNSNMYHSPE VAEILEGVVD VYLGDFKYGN
NACARKYSKI KNYLEIVQPN FEFAYATAEV LLRHLVLPGH LECCTRPIAE WVAKHIPQIR
FNLMFQYRPC YRAMEYPEIG RRLTPEEETK AIEIVKEEGI EDLLV
|
|---|
| |