Gene Mbar_A3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3573 
Symbol 
ID3626502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4586323 
End bp4587315 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content44% 
IMG OID637702404 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_307021 
Protein GI73671006 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.366392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0689174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA TAATCGTTAA AGAGTTGACA AAAAAATTCG GAGAATTTAC TGCCGTTGAC 
AGTGTCTCAT TTTCGGTTGA ACCCGGAGAG CTTTTTGGGC TTTTAGGCCC TAACGGTGCG
GGAAAGACGA CTATAATCAA TATGCTGACG ACTCTTCTTC TTCCGACTGC AGGTGGCGCT
GAAATCGCAG GATATGATCT TAGAAGGGAT CCTGATTCGA TCAGGAATAA TATCGGAATA
ATATTTCAGG ATCCTTCACT TGATATAGGG CTTACCGGGA GGGAAAATCT TGAATTTCAT
GCCATGATGT ACAACATTCG TTCAGATGAG CGGAAAAAAA GAATCCAGGA AGTGCTTGAT
GTTGTGGGAC TGGCTGACAA AGCTGAGATT CTTGTTGAAA ATTATTCTGG TGGAATGAAG
AGGCGGCTTG AAATTGCAAG GGGGCTTATT CATTATCCAA AAGTTTTGTT TCTGGATGAG
CCTACTCTCG GGCTTGATGC ACAGACCCGG AGATCAATAT GGGAATATAT CGGAAACCTG
AATCGAAATT ATGGGACATG CGTCATCCTG ACTACCCATT ATATGGAAGA AGCTGATTTC
CTCTGTGATC GCATTGCGAT AATTGATCAT GGAAAGATAA TTGCACTCGA TACTCCATCA
GGTCTGAAGA ACCGTCTACT GGGAGATTGT GTCAGCCTGA CTATTGATGG AAAGGTTGCT
CTCATAGCGA CTGCTCTTGG GGAGAAAGAA TGGGTAAGGG AAGTTGTTCC TGATGGAAAA
ACGCTTGATC TCATTCTATC GGATTATGAG AAAAACATAC CTGACATTTT TCAGACCGCC
TCCAACCTGG GTGTCGGGAT CAGTTCGATA AATTTCAGCA AGCCAAGCCT TGAGGATGTT
TTCCTCCGCC TTACAGGTTC AATAATACGA GAACAAGAAG GCAGCAGGCA GTCAGCCAGG
CGGGACCGGA TGAGAAGGAG GATGCTCAGA TGA
 
Protein sequence
MSAIIVKELT KKFGEFTAVD SVSFSVEPGE LFGLLGPNGA GKTTIINMLT TLLLPTAGGA 
EIAGYDLRRD PDSIRNNIGI IFQDPSLDIG LTGRENLEFH AMMYNIRSDE RKKRIQEVLD
VVGLADKAEI LVENYSGGMK RRLEIARGLI HYPKVLFLDE PTLGLDAQTR RSIWEYIGNL
NRNYGTCVIL TTHYMEEADF LCDRIAIIDH GKIIALDTPS GLKNRLLGDC VSLTIDGKVA
LIATALGEKE WVREVVPDGK TLDLILSDYE KNIPDIFQTA SNLGVGISSI NFSKPSLEDV
FLRLTGSIIR EQEGSRQSAR RDRMRRRMLR