Gene Mbar_A3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3563 
Symbol 
ID3626492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4574161 
End bp4574709 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID637702395 
Productrubrerythrin 
Protein accessionYP_307012 
Protein GI73670997 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.381154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGA TGACACAGCA GAATCTCATC AATGCGTTTG GGGGAGAAAG TCAGGCATAT 
ATGAGGTATG CGCATTTCGC AAATCAAGCT GAAACCGAAA AACTTAACAA TGTAGCTCGT
TTGTTCCGCG CAATCGCTCA TGCTGAATAT GTACATGCAG GAGACCATTA TAGAGAGTTA
AAACACCTCG ATGGGGGATT TGTCGCAAAT AGTATGGCAG TTTTTGGACC GGGTGATACC
AGGAAAAACC TTAAGCTGGC CATTGCTGGT GAAACATATG AAATCGAGGA AATGTATCCT
GCATATATTG AAGTAGCAAA ATTCCAAGAA GAAAAAGATG CACAAAGAAG TTTTGAATGG
TCCTGGGGTA CTGAAAAAAT GCATAAGATG CTTTATGAAA AAGCTCTAGA ATCGGTGAAC
TCAGGAAAAG ATCCAGAATT AGGTCCTATT CAGGTTTGCG AGGTATGTGG ATATACCCTT
GAAGGAGATG CACCCGATGT ATGTCCCATA TGTGGCGCAT TGAAAGAACA GTTTACAGCA
TTTGAATAA
 
Protein sequence
MRMMTQQNLI NAFGGESQAY MRYAHFANQA ETEKLNNVAR LFRAIAHAEY VHAGDHYREL 
KHLDGGFVAN SMAVFGPGDT RKNLKLAIAG ETYEIEEMYP AYIEVAKFQE EKDAQRSFEW
SWGTEKMHKM LYEKALESVN SGKDPELGPI QVCEVCGYTL EGDAPDVCPI CGALKEQFTA
FE