| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3550 |
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| Symbol | |
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| ID | 3625960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4556236 |
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| End bp | 4558053 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637702382 |
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| Product | cobalt transport ATP-binding protein |
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| Protein accession | YP_306999 |
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| Protein GI | 73670984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.290715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.403183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAATG AAGAGACAGA TAGTATGGAT TCCATGTTGG AGAAAGTTTC AGTTGCCAGG
CCAACTGTGC ATATTAAGCT TGAAAACCTA ACATACAGCT ACCCTCATTC AGATTCCCAG
GTACTTTCGG ACATAAATCT TGAACTTAAA AAAGGGGAAT TTGTGCTCCT TGTGGGTCCA
AGCGGGTGTG GAAAAAGTAC TCTTGTCCGC TGCCTTAACA GGCTAATTCC AGAAATATCA
GGAGGAAGTT TTTCCGGGCG TGTTCTGCTT CAGGGAAAGG ATCTTAAAAA CGAAAAAATT
AAGAAGTTGG CTCTTGAAGT TGGAATGGTG TTCCAGAACC CCGAAACCCA ATTGTTTCGT
ATGACAGTAG CTGAAGATAT TTCTTTTGGG CCTGAAAATT TGGGCTTGCC CATAATTGAA
GTACTGTCCC GAGTAGAAAA AGCTCTCAAA GCAGTTAGGC TGGAGAAGCT AAGGGATCAT
TTCATTTTCA CACTCTCAGG AGGGGAAAAA CAGAGGACTG CAATAGGAGG AAATCTAGCA
ATGGAGCCTG AGATCCTTGT TCTTGACGAG CCAACATCGG ATCTTGACCC TGCAGGCACC
CAGGAGGTGC TTGAACTATT AAATAAACTA AATGAAGAAA AGCAAACAAC CCTTATCCTG
ATAGAACACA AACTTGACTC GGTTTTTGAA ATGGCAGATC GTATGCTTGT AATGGAAGAA
GGCAGACTTA TCTTTGACGG AAAACCTTTT GAAATCCTAT GCCGCAAAGA AGTAACACTT
AAAAAACTCG GGATTTACCC TCCTCAACTC ACTGAAATTG CCCATCTGCT GGGAATGGAT
TATGAAGCTT CAATAGTTCC GTCCTATGAA AACGTTATGA AGCGACTTGC TGAACTTCTG
CAAGTGCCTG CTACCAGGCA ACTTGAAAAC CATAGATGGC AAAAACCTGA AACTTCCATT
TCTATTTTAT CTTCAGAAGA ATACTTACCC TTTGTACGGA TAGAGAACCT CTACTACAGG
CTTGAAGATG GTTCGGAAAT CCTGAAAAAC ATTAATCTGG ATATCAAAAG TGGAGAGTTT
CTTGCTCTTC TTGGGCACAA CGGAGCTGGA AAGACAACTC TAGCAGGCCA CTTGATAGGG
TTTTACAGAC CCTCTTTTGG AAGAATCCTG CTTAATGGAA AAGACATAGA AGGGTATTCG
ACAGCTCAGT TGTCAAAGAA AGTCGGGTAT CTTTTCCAGA ATCCAGATTC GCAGATATTT
ATGGACAGTG TAACTAAAGA AGTCCGTTTT GGACTCGAAA ACGTGGGTAT TCCCAAAGAA
GAAATTGACA AACTGGTAAA CGAATCCCTG GAAACAATGG AACTTTCAGC TTATAAAGAT
AGGCACCCTC ACTCTCTCTC GAGGGGGCAA CGACAGCGCC TGGCAGTAGC TTCTATTCTT
GCTCTCGAGC CGGACCTTCT TGTTCTGGAC GAACCGACAA CAGGGCAGGA CAGAGGGCAC
ATCGCAAAGT TCCTGGATAA GATTAAGGAA CTGAACAAAC TTGGGAAAAC AGTCATTCTC
ATAACACATG ACATGGAACT TGTAGCCGAG TATGCTGAAA GGGTTGTCGT GATGAAGCAA
GGCAAAATCT TGCTGGACGG GCCAACAGCA AATGTGTTCT CGAACACGGA AAAATTAAAT
GAAGCTGGAA TCATCCCACC CCTCCTTTCA AGGCTTTGCT CGGACCTTCG AAAACAAGGA
ATTAATATCC CTCTGCTGCT AACGGTTTCC GAATTGAAAT GTTTCCTCCA GGATCATTGT
CCAGAGTTGA GGGATTGA
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| Protein sequence | MYNEETDSMD SMLEKVSVAR PTVHIKLENL TYSYPHSDSQ VLSDINLELK KGEFVLLVGP
SGCGKSTLVR CLNRLIPEIS GGSFSGRVLL QGKDLKNEKI KKLALEVGMV FQNPETQLFR
MTVAEDISFG PENLGLPIIE VLSRVEKALK AVRLEKLRDH FIFTLSGGEK QRTAIGGNLA
MEPEILVLDE PTSDLDPAGT QEVLELLNKL NEEKQTTLIL IEHKLDSVFE MADRMLVMEE
GRLIFDGKPF EILCRKEVTL KKLGIYPPQL TEIAHLLGMD YEASIVPSYE NVMKRLAELL
QVPATRQLEN HRWQKPETSI SILSSEEYLP FVRIENLYYR LEDGSEILKN INLDIKSGEF
LALLGHNGAG KTTLAGHLIG FYRPSFGRIL LNGKDIEGYS TAQLSKKVGY LFQNPDSQIF
MDSVTKEVRF GLENVGIPKE EIDKLVNESL ETMELSAYKD RHPHSLSRGQ RQRLAVASIL
ALEPDLLVLD EPTTGQDRGH IAKFLDKIKE LNKLGKTVIL ITHDMELVAE YAERVVVMKQ
GKILLDGPTA NVFSNTEKLN EAGIIPPLLS RLCSDLRKQG INIPLLLTVS ELKCFLQDHC
PELRD
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