Gene Mbar_A3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3498 
Symbol 
ID3624896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4488461 
End bp4489894 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content47% 
IMG OID637702325 
Productamidophosphoribosyltransferase 
Protein accessionYP_306949 
Protein GI73670934 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.349457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.30348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGAAG AATGTGGCGT TGCAGGCATA ATTCTACCAG GCGATAGGCC GCAATCCAAT 
ACTGTCGCAT TCAAGCTGTA TTACGCCTTG TATGCCCTCC AGCATAGAGG ACAGGAATCC
ACTGGCATAA TGGTATATGA TGGTACATCC TCTCATTCCA TTAAAGGCAT GGGTCTCGTC
CCTGATGTGT ATAACAAAGA TTCTCTTGGG CACCTGGTTG GAAATGTAGG AGTAGGGCAT
GTCCGCTACT CAACCACCGG AGGATCAAAA ATCGAAAATT GCCAGCCCTT TGTTCTGAAA
TTCAAAGGAG GAGCAGTTGC AATTGCCCAT AACGGGAACC TGGTTAATGC CAGAACGCTC
AAGGATGAAC TGGAGTGTGA AGGCCGTATC TTTATCAGTG AGTCCGATAC AGAAGTTATT
GGCCACCTTC TTGTAAAAGA ACTGATAAGA CACGACCCTA TAGAATCAAT CCGGAATGTC
ATGCGTAAGC TTGTCGGTTC CTATTCCCTG GTTATCCATA TCGGCGGTGT TCTGTATGCT
GTGCGTGACC CTCTCGGTCT TAAGCCGCTC TGCTTTGGGG AAGTCGATGG TGGATATGCA
GTATTCTCGG AAAGCGTAGC CCTTGATACC CTTAACGGCA CCCTTATCAG GGATGTACGG
CCAGGTGAGG TAATAGTTTT TACAGGCGAC AGCTTTGAGA GCTACCAGAT AGGAAACGAG
CCTCATCCCG CACATTGTGT GTTTGAGTTC ATTTATTTTG CAAGACCCGA TTCTATTATT
GACGGAAAAC TGGTCTACAA AGTTCGGGAA AATATCGGGA GAGAGCTTGC CAGAGAACAT
CCGGTAGAGG CTGATGTTGT TTCACCTGTC CCGGACTCTG GGATTACTTC CGCAATCGGC
TACGCCAGGG AGTCAGGCAC CAAATACCTT GAAGGCTTGA TGAAGAACCG TTATATAGGG
CGTACATTTA TCCTGCCTGG CCAAGAGCTG CGTGAAACCG CAGTTCGGCT TAAAATGAAT
GCTATCCAGG ATAATGTTAA AGACAAACGT GTTGTTCTGG TTGACGACAG TATTGTCCGT
GGTACAACCT CCAGGCGGAT TATAGATATG GTCCGCAGGG CAGGTGCTTC AGAAATCCAT
GCAAGGATAG GAAGTCCAGC AATTATTGCT CCCTGTTATC TGGGTATAGA TATGGCCACC
AGGCAAGAAC TTATCGCCTC TTATAAGACC GTAAAAGAGG TTGAAGGCCT TATTAATGCG
GATTCACTCG GATATCTAAG TATTGACGGA CTTATGAGGG CTCTTGGGCG CGATAAGTGC
GACATGTGCC TTGGCTGCCT TACAGGTGAG TATCCTGTCG AAATTCCTGG AGAAAACTGC
ATAAGGAAGC AGACACGTCT GGATGATTTT AACAATAACC AGGAAAGTTC CTGA
 
Protein sequence
MKEECGVAGI ILPGDRPQSN TVAFKLYYAL YALQHRGQES TGIMVYDGTS SHSIKGMGLV 
PDVYNKDSLG HLVGNVGVGH VRYSTTGGSK IENCQPFVLK FKGGAVAIAH NGNLVNARTL
KDELECEGRI FISESDTEVI GHLLVKELIR HDPIESIRNV MRKLVGSYSL VIHIGGVLYA
VRDPLGLKPL CFGEVDGGYA VFSESVALDT LNGTLIRDVR PGEVIVFTGD SFESYQIGNE
PHPAHCVFEF IYFARPDSII DGKLVYKVRE NIGRELAREH PVEADVVSPV PDSGITSAIG
YARESGTKYL EGLMKNRYIG RTFILPGQEL RETAVRLKMN AIQDNVKDKR VVLVDDSIVR
GTTSRRIIDM VRRAGASEIH ARIGSPAIIA PCYLGIDMAT RQELIASYKT VKEVEGLINA
DSLGYLSIDG LMRALGRDKC DMCLGCLTGE YPVEIPGENC IRKQTRLDDF NNNQESS