Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3498 |
Symbol | |
ID | 3624896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4488461 |
End bp | 4489894 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637702325 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_306949 |
Protein GI | 73670934 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.349457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.30348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGAAG AATGTGGCGT TGCAGGCATA ATTCTACCAG GCGATAGGCC GCAATCCAAT ACTGTCGCAT TCAAGCTGTA TTACGCCTTG TATGCCCTCC AGCATAGAGG ACAGGAATCC ACTGGCATAA TGGTATATGA TGGTACATCC TCTCATTCCA TTAAAGGCAT GGGTCTCGTC CCTGATGTGT ATAACAAAGA TTCTCTTGGG CACCTGGTTG GAAATGTAGG AGTAGGGCAT GTCCGCTACT CAACCACCGG AGGATCAAAA ATCGAAAATT GCCAGCCCTT TGTTCTGAAA TTCAAAGGAG GAGCAGTTGC AATTGCCCAT AACGGGAACC TGGTTAATGC CAGAACGCTC AAGGATGAAC TGGAGTGTGA AGGCCGTATC TTTATCAGTG AGTCCGATAC AGAAGTTATT GGCCACCTTC TTGTAAAAGA ACTGATAAGA CACGACCCTA TAGAATCAAT CCGGAATGTC ATGCGTAAGC TTGTCGGTTC CTATTCCCTG GTTATCCATA TCGGCGGTGT TCTGTATGCT GTGCGTGACC CTCTCGGTCT TAAGCCGCTC TGCTTTGGGG AAGTCGATGG TGGATATGCA GTATTCTCGG AAAGCGTAGC CCTTGATACC CTTAACGGCA CCCTTATCAG GGATGTACGG CCAGGTGAGG TAATAGTTTT TACAGGCGAC AGCTTTGAGA GCTACCAGAT AGGAAACGAG CCTCATCCCG CACATTGTGT GTTTGAGTTC ATTTATTTTG CAAGACCCGA TTCTATTATT GACGGAAAAC TGGTCTACAA AGTTCGGGAA AATATCGGGA GAGAGCTTGC CAGAGAACAT CCGGTAGAGG CTGATGTTGT TTCACCTGTC CCGGACTCTG GGATTACTTC CGCAATCGGC TACGCCAGGG AGTCAGGCAC CAAATACCTT GAAGGCTTGA TGAAGAACCG TTATATAGGG CGTACATTTA TCCTGCCTGG CCAAGAGCTG CGTGAAACCG CAGTTCGGCT TAAAATGAAT GCTATCCAGG ATAATGTTAA AGACAAACGT GTTGTTCTGG TTGACGACAG TATTGTCCGT GGTACAACCT CCAGGCGGAT TATAGATATG GTCCGCAGGG CAGGTGCTTC AGAAATCCAT GCAAGGATAG GAAGTCCAGC AATTATTGCT CCCTGTTATC TGGGTATAGA TATGGCCACC AGGCAAGAAC TTATCGCCTC TTATAAGACC GTAAAAGAGG TTGAAGGCCT TATTAATGCG GATTCACTCG GATATCTAAG TATTGACGGA CTTATGAGGG CTCTTGGGCG CGATAAGTGC GACATGTGCC TTGGCTGCCT TACAGGTGAG TATCCTGTCG AAATTCCTGG AGAAAACTGC ATAAGGAAGC AGACACGTCT GGATGATTTT AACAATAACC AGGAAAGTTC CTGA
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Protein sequence | MKEECGVAGI ILPGDRPQSN TVAFKLYYAL YALQHRGQES TGIMVYDGTS SHSIKGMGLV PDVYNKDSLG HLVGNVGVGH VRYSTTGGSK IENCQPFVLK FKGGAVAIAH NGNLVNARTL KDELECEGRI FISESDTEVI GHLLVKELIR HDPIESIRNV MRKLVGSYSL VIHIGGVLYA VRDPLGLKPL CFGEVDGGYA VFSESVALDT LNGTLIRDVR PGEVIVFTGD SFESYQIGNE PHPAHCVFEF IYFARPDSII DGKLVYKVRE NIGRELAREH PVEADVVSPV PDSGITSAIG YARESGTKYL EGLMKNRYIG RTFILPGQEL RETAVRLKMN AIQDNVKDKR VVLVDDSIVR GTTSRRIIDM VRRAGASEIH ARIGSPAIIA PCYLGIDMAT RQELIASYKT VKEVEGLINA DSLGYLSIDG LMRALGRDKC DMCLGCLTGE YPVEIPGENC IRKQTRLDDF NNNQESS
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