Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3452 |
Symbol | hisS |
ID | 3626425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4427143 |
End bp | 4428372 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637702281 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_306905 |
Protein GI | 73670890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.192864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTTA ATAGACCAAG AGGGACCCGG GACTTTTTAC CTGCCGATAC TGCCCGGAGA AGATACGTGG AAAGTGTTAT GCGAGATGTT GCCCGCAAAT GGGGCTACAG TGAAATCATT ACGCCCACGT TTGAACATCT GGACCTTTTC ACCCTTAAAT CAGGGGAAGG GATCATAGGG GAACTCTACA ATTTTACGGA CAAAGGCGGC AGGGAAATGA CCCTCAGGCC CGAGCTTACT GCTCCTGTCA TGCGCCTGTA TATAAACGAA CTTCAGCCTT TCCCGAAGCC TTTAAAATTG TTCTACTTCG AAAACTGTTT CCGCTATGAG CGTCCCCAGA AAGGCCGTTT CAGGGAGTTC TGGCAGTTCG GGGTTGAACT TATAGGAAGC GGAAAACCTG ATTCCGATGC CGAGGTTATT GCCCTTGCCG ATGCCATGTT AAAAGCCGCC GGAGTGAAGG GCGACATGAA GCTCGGAAAC CTTGCGGTCA TACGTACGCT CTTGAGCGGG CTTGAACCCG AAATTGTGAG CAAGGTCATG CGGCTTGTGG ATAAAAAAGA GTACGCCGGC CTTGAAGCCC TGCTTGAAGA AATAGGAGCC GAAGAACAGC TCAAGTCCGA CCTTTTCCAC CTGATAAAAC TGGAAGGCAA GCGTATCCTC CCAGAGGTAA TAAAAATCGT AGGAAATATC CCTGAGCTTG TAAGCTTTGA AAAAACCCTT AAGCTTCTCG ACGCATACGG AGTCGATTAC TCTCTTGACT TCGGGATTGC ACGCGGGCTT GATTACTATA CAGGCATGGT TTTTGAGGTC TATGCCGAGG GCCTCGGAGC TCAGAAACAG GTCTGTGGTG GAGGTTCTTA CCAGCTTATC AAGCTTTTCG GAGGCGGAGA CGTGCCTTCA ACCGGCTTCG GAATAGGTTT TGACCGGATT ATGGAAATCT GTCCTCTCAC CCCCCCTGCT CCTAAAACCC TTATGCTGAT CTCGAAACCC GATCTTCACC TGAAAGCAAT AGGTTTTGCA AATAAATTAA GGAAGTACGT GCCAGTCCAT GTAGATCTCA TGCAGCGTAA TTTCAAAGCC CAGCTTTCCT ATGCAAATAC CATCAACGCC GATTACGTGG TTATAGTCGG GGAAAAAGAA CTTGAAGTCG GAAAACTGAC TCTGAGAGAT ATGGTTTCAG GAGAACAGGA ACTTCTGACG CTGGAAGAGA TTATTGAGAA AGTTTGTTAA
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Protein sequence | MTVNRPRGTR DFLPADTARR RYVESVMRDV ARKWGYSEII TPTFEHLDLF TLKSGEGIIG ELYNFTDKGG REMTLRPELT APVMRLYINE LQPFPKPLKL FYFENCFRYE RPQKGRFREF WQFGVELIGS GKPDSDAEVI ALADAMLKAA GVKGDMKLGN LAVIRTLLSG LEPEIVSKVM RLVDKKEYAG LEALLEEIGA EEQLKSDLFH LIKLEGKRIL PEVIKIVGNI PELVSFEKTL KLLDAYGVDY SLDFGIARGL DYYTGMVFEV YAEGLGAQKQ VCGGGSYQLI KLFGGGDVPS TGFGIGFDRI MEICPLTPPA PKTLMLISKP DLHLKAIGFA NKLRKYVPVH VDLMQRNFKA QLSYANTINA DYVVIVGEKE LEVGKLTLRD MVSGEQELLT LEEIIEKVC
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