| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3445 |
|---|
| Symbol | |
|---|
| ID | 3624882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4413739 |
|---|
| End bp | 4414908 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637702274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306898 |
|---|
| Protein GI | 73670883 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000235465 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.187048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAAT TGAAAATAGC TTTGAGGCAA GTTTTTTCCA GAAAACGGCA AACCTTTTTT
GCCATACTTG CAGTTGCCCT CGCCGTAGCC GTAATTACGG TAATGATGGC GATGCTTTCT
GGCTTTCAAG GAGAGCTTAT AAAGTCCAGT ACTGAGAACA GTCCCCATAT TGTTATCAAT
CCTCAGGATG AAAAAGACGG GTTCATTCAT CTTTACAAAT CCAATTCGGC CCTGATTATG
GAAAAAGAAG GAGTTATAGC AGTGTCTCCC AAATATCTGG GTCAGGCAGC CCTGGAATAT
AAGGATAATG CAGAGGCTAT TTCACTTCAG GGGATTGAAC CTGAGGCTGA AGATAAGGTT
ATGAGAGTAA GCAAGGATAT GATAGAAGGA AGCTTTCTAT CGCTTACCCA TACAAGGCAC
GGAATAGTAC TTGGAGATAA ACTTGCGGAA AATCTTGGGG TTCAGCCTGG GGACCGGGTA
GATGCGGTGT TTCCTGGCTC AAAAACAACT TCTTTTAAGG TTATAGGTCT GATTCACACA
GGAACTGAGG CAGATGAAGT AACAGCCTAT GCAAGGCTGG ACTCGGTACA GGATTTCTTC
AATGAACCCG GAGTTGTAAG CACAATAGGG GTCAGGGTCT CAGACCCTTA CCAGGCTGAC
ATTATAGCAA GTTCAATTGA AAGAGAAACC GAGCTTAACG CAGTAAGCTG GATAGAAGCA
AATGCAGAAA TCCTTAATCT TCTAAACACT CAGAAGGTTT TCGTAAACGT TTTCTACATC
CTTATTTACG GGATTGCTGG TTTCGGGATT GCAAATACTC TGATTACCAT TGTTGCCCAG
CGAACCCGAG AAATAGGCAT CTTAAAAGCT ATGGGAGCCT CTCAAAAAAG CATAATGATT
GTTTTTCTTT TCCAGTCTGT AATTCTCGGA GCTATGGGAT TGGTTTTGGG TACTATTCTG
GGTTATATTG CAACCATTAC TCTGCAGAGT TATAAAATCG CAGTTCCTCA GGAGATGTAT
TTCGGGCTCC AGACACTTCC TCTTGAAGTC GAACCTCTCA ACTTCGTATA TGCTGCTTTC
TTTGCTTTCA TAATCAACAT AATCTCAGGT ATTTACCCTG CAAGGAAAGC TGCAAAGCTT
GACCCTGTAA AAGCCATAGA AAGTGCCTGA
|
|---|
| Protein sequence | MYELKIALRQ VFSRKRQTFF AILAVALAVA VITVMMAMLS GFQGELIKSS TENSPHIVIN
PQDEKDGFIH LYKSNSALIM EKEGVIAVSP KYLGQAALEY KDNAEAISLQ GIEPEAEDKV
MRVSKDMIEG SFLSLTHTRH GIVLGDKLAE NLGVQPGDRV DAVFPGSKTT SFKVIGLIHT
GTEADEVTAY ARLDSVQDFF NEPGVVSTIG VRVSDPYQAD IIASSIERET ELNAVSWIEA
NAEILNLLNT QKVFVNVFYI LIYGIAGFGI ANTLITIVAQ RTREIGILKA MGASQKSIMI
VFLFQSVILG AMGLVLGTIL GYIATITLQS YKIAVPQEMY FGLQTLPLEV EPLNFVYAAF
FAFIINIISG IYPARKAAKL DPVKAIESA
|
|---|
| |