| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3402 |
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| Symbol | |
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| ID | 3624649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4366747 |
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| End bp | 4368234 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637702230 |
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| Product | F420H2 dehydrogenase subunit M |
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| Protein accession | YP_306855 |
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| Protein GI | 73670840 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00767556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGG TTGCATCACT GTTGATTCTG GTGCCGCTGA TTTTCGCAGC AGTGACCTTT
TTCACAAAAA CGAAAGAACA GGCTGCAGGA CTGGCTTTTT TAGGGTCCCT TGCGACTCTT
GGTCTTACCC TGTATGCCTA CCTGAACTTT GACAGCAGTA CGGCTGCCAT GCAGTTCTTT
GAATCGATAG ACTGGATTCC CTTGCTAGGA GTCAAATATT CGGTTGGTAT TGACGGCATC
TCCATGCCTC TTATCCTCCT GAATGCAATA GTTATCCCGT TCCTGATCCT TTATAGCTGG
AAGGAAGAAA GAGAAGACTC GAACAGGTTT TATGGGCTGA TCCTGACCAT GCAGGCTGCA
GTTATAGGAG TCTTCGTAGC CCTTGATTTC GTGGTCTTCT ATATCTTCTG GGAGCTTACT
CTGATTCCTC TCTTCTTCAT GGTAAACATC TGGGGAGGAG AAAAGCGGGC CCATGCGTCT
TATAAATTCT TTATCTATAC GCATGTTGCC TCTCTGGTAA TGCTTCTTGG GATCTTCGGG
CTTTTCTATG CCTCCTGGCA GCAGACCGGG GTTCCTACCT TTGACATAAG GGAGCTGGTT
GGACAGTTCC AGTTCTTAGG GTCCGGCCTG TTAAGGAATG CAATCTTCCT CTCAATCATT
TTCGGGTTCC TGGCAAAGCT GCCAACTTTC CCCTTCCATT CCTGGCTTCC GGATGCTTAT
ACCGAAGCCC CGACTGCAGG TAGTGTGCTC TTTATTCTGC TCAAGATAGG AGGATACGGG
CTTTTCAGAA TTTCACTTCC GATGCTTCCG AATACTGGTA ACCCTGAGCT TATGATTACT
ATTCTGGGCC TGCTTGGAGC TTTCAGCATA TTGTACGGGG CGCTTCTGGC TCTGAGACAG
AAAGACCTCA AGCGTATGAT AGCGTATTCC AGTTTAAGCC ATATGGGATA TGTTTTATTG
GGTTCGGCAG GCTTTGTCGC CCTTTCGGTT TCAGGTGCTA TGTTCCAGCA GTTTTCCCAC
GGGCTTATAA TGAGTATCAT GTTCATGTCC GCAGGAGCGA TCCAGACCAG CACGGGAACA
AGGATAATAA ATAATCTTGG CGGGCTTGCA AAGAAGATGC CGACGCTGGC TGTACTTATG
ATGCTAGGGT TTATGGCATC CCTTGGCCTG CCAGGGTTGA CTGGCTTTAT TGCCGAGTTC
CTGGTGCTGG CCTTCAGCTA TGTCAATCTG CCTGGATTTG TCTTGCTTGC CCTTCTGGCA
ATAGTGATTA CTGCAGGCTA CCACCTCTGG GCAATGCAGA GGGCAATGTT TGGAGTTTAT
AACGAGAAAC TCGGAGATGT CAGGGACATT AACTCTCTTC AGGTCTTTTC CATGGCAGTA
ATTGCACTGC TTGTGGTATA TTTCGGCTGG AACCCGAATC CAGTGCTTAA TATGATGATC
ACGAATTCGG AAGCAATAGT AAGCCTTGCG GCTGCTCTGG GGGTGTAA
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| Protein sequence | MLPVASLLIL VPLIFAAVTF FTKTKEQAAG LAFLGSLATL GLTLYAYLNF DSSTAAMQFF
ESIDWIPLLG VKYSVGIDGI SMPLILLNAI VIPFLILYSW KEEREDSNRF YGLILTMQAA
VIGVFVALDF VVFYIFWELT LIPLFFMVNI WGGEKRAHAS YKFFIYTHVA SLVMLLGIFG
LFYASWQQTG VPTFDIRELV GQFQFLGSGL LRNAIFLSII FGFLAKLPTF PFHSWLPDAY
TEAPTAGSVL FILLKIGGYG LFRISLPMLP NTGNPELMIT ILGLLGAFSI LYGALLALRQ
KDLKRMIAYS SLSHMGYVLL GSAGFVALSV SGAMFQQFSH GLIMSIMFMS AGAIQTSTGT
RIINNLGGLA KKMPTLAVLM MLGFMASLGL PGLTGFIAEF LVLAFSYVNL PGFVLLALLA
IVITAGYHLW AMQRAMFGVY NEKLGDVRDI NSLQVFSMAV IALLVVYFGW NPNPVLNMMI
TNSEAIVSLA AALGV
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