Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3374 |
Symbol | |
ID | 3625682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4333101 |
End bp | 4334531 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637702202 |
Product | hypothetical protein |
Protein accession | YP_306827 |
Protein GI | 73670812 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0508877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0110235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACG CAGGTCTGCA TGTCTCTCTT GATAATTTTT CCGTGAGGGT ACGCACAAGG AATTTCAATT ACTGGAATGT GAGTGGCGCA AACGTTGTGG GAGTTAAAGA GGGAAATGTC CTTAAAAATG AGATTATTCT CGTAACTGCA CATTATGATT CAAGAATAAT TGTACCTCCT AAACCCGGTC TACGAGGTTT TTTTGATTCC AGGGTCAAAA GGCCCTATCT CTGGCCGATC TGGTCCGATA CTTACGTTTG CGAATCGGCC AACGGAACAG GAGTGGATGA TAATGCAGGT GGAGTTGCCT GCATGCTTGA ACTTGCAAAA ACATTGCAGA ATAAGTCATT AAACAGGACA ATATATTTCA TTGCCTTTTC CGGAGAAGAG TCTAATCTTC TTGGCAGCCA GGCATGGGTT GAAGCCCATC CTGAGCTGAA AGACAATATT GTTGCAGTTG TTAATCTCGA CTGCGTAGGA AACGAACCTC TTTGCGTATG CTATCTTCCC CAGTATGCCT GGCTTAAAGA TATTTTTGAA AATGAAGCAA GAAATTCGGG GGTTAGAATT CAATCTGCAC TTATAGAAAG AGGAGATCAT GAAATCTTTT GGGAAAACCA CATTCCTGCA GTAGTCCTTT GCCACCACAA TTACAAAAGT CATGATAATT TCCACGAATT GAGTGATACA GTTGATAATA TCGATTTTTC GGTTATCAGG AATGCAAGTA CTCTGGCTGC AAGAAGTGTT ATTTATCTGG CAGATCCAGA TGAGAATCAG GCTCCTCTTG TTAATGTTTC CAATCCGGAG ATTTCAGAAG CCTCATTTGA ACTCATCTAT AACGTCTCCG ACCCCGAAAG TACTGTGGAA GTCTTTTTTG ACAATCAGAG CCTGGGAAAT CTCCAATCAG GCAGGACTTT TTCGCTTCCG GTAGGAGGAC ATACTATCAA GGTTCTGGCA ACCGACCGTT ATGGAAATAG AGGCACCGAG AGCATAAATG TTGTAAATAA GGAAAAACAA AGCAGAAGTT CTGAACCTCC TCATCAGGAA ATAGAGAGCT CTGAGAATGA GGTATCATAT GTAATCGGTT ATCTAGAAAA TTCCGTGGAC TCAAACAAAA CTCTTTATTA TTATCTGGAT GATTTCGGGC CTCTGGATCC CGAGAATCTT TTTGTTCTCA CCCCTGGTAG TCATAATTTA AAAATATGGT TTGAAAATGA AAACGGAACT CTGTTCATGG AGAATAAAAC TTCTGATTTT AGAAAATATT CCATGGAACG AGTCCAGGTA GATAACCCAT TCATGGATCG TAGAAATCCT CTTATCTTTG TCTCAGGTGT AGTTGCAATT TTGGCTGCTT TTGCGTTTTA TGGGAAGTGG ATAAAAAAGA GATTTTCGGG TCCAAAGGTC TCTGAAGATG AAAAAAAATA G
|
Protein sequence | MENAGLHVSL DNFSVRVRTR NFNYWNVSGA NVVGVKEGNV LKNEIILVTA HYDSRIIVPP KPGLRGFFDS RVKRPYLWPI WSDTYVCESA NGTGVDDNAG GVACMLELAK TLQNKSLNRT IYFIAFSGEE SNLLGSQAWV EAHPELKDNI VAVVNLDCVG NEPLCVCYLP QYAWLKDIFE NEARNSGVRI QSALIERGDH EIFWENHIPA VVLCHHNYKS HDNFHELSDT VDNIDFSVIR NASTLAARSV IYLADPDENQ APLVNVSNPE ISEASFELIY NVSDPESTVE VFFDNQSLGN LQSGRTFSLP VGGHTIKVLA TDRYGNRGTE SINVVNKEKQ SRSSEPPHQE IESSENEVSY VIGYLENSVD SNKTLYYYLD DFGPLDPENL FVLTPGSHNL KIWFENENGT LFMENKTSDF RKYSMERVQV DNPFMDRRNP LIFVSGVVAI LAAFAFYGKW IKKRFSGPKV SEDEKK
|
| |