Gene Mbar_A3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3279 
Symbol 
ID3627889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4215131 
End bp4216336 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content42% 
IMG OID637702115 
Productaminotransferase 
Protein accessionYP_306740 
Protein GI73670725 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.507465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGCA AGACAACATT TGAAATAGAG GACAAGTGCC TCCCGCCTTT CTTCGTGAAG 
CAGAAAATCT CCATTGAAAA AGGAGATGGA GTTTATGTAT GGGATGAAGA AGGGAAGATG
TATATTGATT TCACAGCAGG TTGGGGTGTA ACATGTATTG GTCATGCAAA CCCGGTCATC
ACCGAGGCCT TGATCGATCA GGGGAAAAAA ATAATTCAAA ACCCCAATTC GGGACTTACA
TATTCTCCGG CACGTGCACG TCTACTGTCC TTACTCGCAG AAATTCTGCC TCTCAATCTT
ACAAGAGTAT TCTTCACAAA TAGCGGAGCT GAAGCAAATG ACGCTGCCAT TAAACTTGCT
CGAAAGGTAA CAGGCAGACC TGATATAATT TCTACAGATC AAAGTTTTCA TGGGCGTACT
ATCAGTACAA CATCGGCTAC AGGTCAGGCC AAGCATAGAG ATAGGTATAG TCCTCTGATG
CCTAATTATC GTTTTGTTCC CTATGATGAC TTAGAGGCTA TGGAAAATTC TCTGGACGAG
AATGTTGCTG CAGTAATTCT TGAACCTATT CAGGGAGAAG GTGGAGTTTG CATACCTTCT
GAAGGATATC TGAAAGAGGT AAGCAACCTG TGCAAGAAGA ACGGAAGCCT GCTGATCGTA
GATGAAATCC AAACTGGCTT CTTTAGAACA GGGCCAGCTT TTGTTACAAG TTCCTATGGT
GTGAGAGCAG ACTTTATGAC AATGGCAAAG GGAATTGCAG GTGGTTTCCC ATTTGGTGCT
TTTGCTTTGT CTGAGAACGT CGCAAAGAAA CTCGAGATCG GCGACCATGG AGGTACATAT
TGTGGCAACC CTCTTGGTTG TGCCGTTTCC TATGCAGTGA TAAAATACCT GATAGATAAC
AACATTTCCA GAAATGTAGA AGAAATGGGC TGTTTTGCCC TGAAAAGAAT GAGCTTATGG
CCTAATATTT ATGGAAATGT AATTGCTGAC ATAAGGGGAA AAGGGCTTCT TATTATGGTC
GAATTCCAGA GCGAAGAGAT TGCTACAAAT GTCAAAAACG AGTGCTTGGC AAGAGGCTTG
TTTGTCACTC AAACTCAGGG CAATGGAATC AGGATATTTC CCGCACTAAA CGTTAAGAAG
GAAGAGTTAG AGGAAGGTCT TTTAATTATC GAGGACGTGG TCAAGAAAAT TAATCTCACC
TTCTAA
 
Protein sequence
MSSKTTFEIE DKCLPPFFVK QKISIEKGDG VYVWDEEGKM YIDFTAGWGV TCIGHANPVI 
TEALIDQGKK IIQNPNSGLT YSPARARLLS LLAEILPLNL TRVFFTNSGA EANDAAIKLA
RKVTGRPDII STDQSFHGRT ISTTSATGQA KHRDRYSPLM PNYRFVPYDD LEAMENSLDE
NVAAVILEPI QGEGGVCIPS EGYLKEVSNL CKKNGSLLIV DEIQTGFFRT GPAFVTSSYG
VRADFMTMAK GIAGGFPFGA FALSENVAKK LEIGDHGGTY CGNPLGCAVS YAVIKYLIDN
NISRNVEEMG CFALKRMSLW PNIYGNVIAD IRGKGLLIMV EFQSEEIATN VKNECLARGL
FVTQTQGNGI RIFPALNVKK EELEEGLLII EDVVKKINLT F