Gene Mbar_A3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3268 
Symbol 
ID3627819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4198815 
End bp4199804 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content38% 
IMG OID637702104 
Producthypothetical protein 
Protein accessionYP_306729 
Protein GI73670714 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0855187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AGGGGAATCT ATGTTCAATA GCTTTAGCTT CAGTATTCCT GGTTTTTGTT 
TTTTTGATTT TAATCTCAGC CGCAGCTTCA GCGGCTCAAG TTACGAAAAT TGGCACAGGA
TACGATCCTG CTGTGTATGG TAACAAGGTA GTATGGACAA ATGGAGTTGT TATTCATTTA
TACGACCTGA CCAACAGAAT GGACACTACG GTTAGCTCTT CTGGGGCATT CAGTCCAGAT
ATTTACGGTA ATACATTAGT GTGGCGTGAC GAAAGAAGTG GAACACCAAA GCTTGCTGTG
TACGATATAC CAACAGGCAC AAAATCTTAC ATCACACAAA ATGTAGACCA ATACAGTAAA
CCTGCCATTT ACGGCGACAG AATCGTCTGG AGTGCAGATG AGAATGTGTA TCTGAGAAAC
ATATCTACAT CCACACAGAA TAAAATCGGA AACGGTAGTA ATCCCGACAT ATATGATACA
AAAGTGGTGT ATTCCTCTTA TTCAGAAGAT CCAGAAGCGG ATATGGCTAT CAGAATGTAT
GACATCAATA CAACAGAAAA AATAACCGTC AGTTCACATG GAGATCCAAC CATGCCGCAG
ATATGGGGCA CTAAAATCAT CTGGTCTGAC GTATATAATC ATCAGGGATA TATTGTGATG
TATGATATAT TAACAAAGAA AACCATAGAT GTCACACATC AACTTGGCAC TGACCCATAT
GGAAATGAAT ACGGCGCCAG TACAGGGACA CATATTGCCA TACAAGATGA TAAAATTGTA
TACAATAAAT GTGTTGATGA TTATGAAGGC AAACCCGGAG TATATGTATA TAACATATCT
ACAGGACAAA GCACACTAAT ATATAAATAT CCTGAAGAAG TTTATACGAC ACCAGAAGTA
TACAATAACA CTGTTGTATG GGGAATGGAC AAGAACTATG TTGATAGTAC GACTGGCAAT
GATATCTATT TATACGACCT TGCAGCCTGA
 
Protein sequence
MKNKGNLCSI ALASVFLVFV FLILISAAAS AAQVTKIGTG YDPAVYGNKV VWTNGVVIHL 
YDLTNRMDTT VSSSGAFSPD IYGNTLVWRD ERSGTPKLAV YDIPTGTKSY ITQNVDQYSK
PAIYGDRIVW SADENVYLRN ISTSTQNKIG NGSNPDIYDT KVVYSSYSED PEADMAIRMY
DINTTEKITV SSHGDPTMPQ IWGTKIIWSD VYNHQGYIVM YDILTKKTID VTHQLGTDPY
GNEYGASTGT HIAIQDDKIV YNKCVDDYEG KPGVYVYNIS TGQSTLIYKY PEEVYTTPEV
YNNTVVWGMD KNYVDSTTGN DIYLYDLAA