| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3207 |
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| Symbol | |
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| ID | 3627110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4123205 |
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| End bp | 4124608 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702046 |
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| Product | putative transmembrane efflux protein |
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| Protein accession | YP_306671 |
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| Protein GI | 73670656 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00227095 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGATG AACGGGAAAT GAGGTCTGCA AGTATTGGAA AGCTTTTTCT GAAATTCGTT
CTCCCGGCAA CTATCGGATT AATTGTTGCT GGAATCCAGG GAATTGTTGA CGGTTTCTTT
GTCGGGAATG CTGTAGGCAG CCAGGGGCTT GCAGCGATAA CTCTTGCATT TCCTGCACTT
CTAGCCATAA TTGCTGTAGG ACAGATGATA GGGATCGGGA CTTCAAGCCT TGTAGCCCTG
GCCCTTGGCA GAAATAATCG GCAGGAAGCT CTCAAGCTCG TACATACTGC TTTTCCCATG
CTTCTGTTTG TGGGAATAGG GCTCACCACA ATAGGGCTGG ATGCTTCGGG ATCTTATCTC
CATCTCCTGG GAGCTTCTGG TTCAGTCTTT AGCATGGCAA ATAGTTATCT TAGAGTCCTA
TTCTCAGGCT CGATACTCCT GATTCTGTCC ATTGCTCTCG AACCTCTTGT AAGAAATGAT
GGGAAACCAA GACTTGCTAT GACATGTGTG GTTGCGAGTG TTCTCGTAAA CATGGTTCTT
GACTACTTAT TTGTCGTGCG AATGGAAATG GGGGTTACCG GGGCTGCAAT AGCCACGGTT
ATTGCTTTCT CTCTTTCCGG AATTCTGCTA GCTCTGTATT TTTTCAGCGG ATGGGCTGGG
CTGAGGCTAA AACCCCGTTC CCTCTCTCTG GAGCCGAGAA TAATTATCAA AATTATGAGA
ACAGGCTTTC CTTCCTTTGC AATGCAGTTT TCAACTTTCA TCCTGCTCTT TGCGAACGAG
TACATGCTGC TCAGTTACGG CTCGGAACTC GCAGTTTCAG GCTATGGAAT TATAGGTTAC
GTTTTCTCGA TATTCTCCTT GATTTTTGAA GGAATAGCAG TTGGCACCCA GCCAATCCTC
GGTTTTAATT ACGGAGCCCG TTGTTATTCC CGTGTTGCAG GGACCTTGAA GATAGCTGTT
ATCTCCTGCC TTGTGGCCGG ATTGATTGGT TTCATGCTTC TCTCTATGTA TCCGGAACAG
TTTATTCTCA TCTTCAATCG CGACAGCCCC GAACTCCTGG AAATTACTCT TAATGGAATG
GAGATTTTCG TGTTTTCCCT CCTTACCCAT GGGACGGTTA TGCTGGGTTC CGTATATTTC
CAGTCGATAA ACAAAATCAG ATATTCTCTT TTCATCCAGC TAGGAACAGT TTTTCTCTTC
CTCCTTCCTC TGCTCTGGAT TTTACCTTCT TTACTTGATC TTAATGGAGT CTGGCTTGCA
ACCCCTGCTG CGGAATTTCT GATGTTCCTG GTCGTGCTGG GCTTGCTCTG GAAAGAGTTC
GGTTTTCTCA AGAATGGGAT AACTGTAAGT GAGGAAGGAA ACTTCCCTGC TTCTGAGATT
GTATTAACTA CCAACGAAGA TTAA
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| Protein sequence | MTDEREMRSA SIGKLFLKFV LPATIGLIVA GIQGIVDGFF VGNAVGSQGL AAITLAFPAL
LAIIAVGQMI GIGTSSLVAL ALGRNNRQEA LKLVHTAFPM LLFVGIGLTT IGLDASGSYL
HLLGASGSVF SMANSYLRVL FSGSILLILS IALEPLVRND GKPRLAMTCV VASVLVNMVL
DYLFVVRMEM GVTGAAIATV IAFSLSGILL ALYFFSGWAG LRLKPRSLSL EPRIIIKIMR
TGFPSFAMQF STFILLFANE YMLLSYGSEL AVSGYGIIGY VFSIFSLIFE GIAVGTQPIL
GFNYGARCYS RVAGTLKIAV ISCLVAGLIG FMLLSMYPEQ FILIFNRDSP ELLEITLNGM
EIFVFSLLTH GTVMLGSVYF QSINKIRYSL FIQLGTVFLF LLPLLWILPS LLDLNGVWLA
TPAAEFLMFL VVLGLLWKEF GFLKNGITVS EEGNFPASEI VLTTNED
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