| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3199 |
|---|
| Symbol | |
|---|
| ID | 3627141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4114429 |
|---|
| End bp | 4115145 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637702038 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306663 |
|---|
| Protein GI | 73670648 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.180228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0164124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGACCG ATTTTTTGAA TGGGCTTGTC AATATGCCCC TATTTGGGAT CTTACTCTCT
TTAGTAGCTT TCCAGATAGG CACACTATTA TATAAGAAGA CCCAGCTTTC GATTCTTAAC
CCTCTGCTTG TGGCTTCTGT ACTTGTAATG GTTTTCCTTC TATTCTTTGG GATCAATTAT
GAGACTTACA ATCTTGGAGG AAATTATATT TCTTTCTTCC TCGGACCCGC AACTGTGGTT
CTTGCAGTAC CTCTCTATAA AAAAATTCAG CTCTTGAAAA GTAATGCTCT TCCTATCCTT
GCAGGAATAA TTGCAGGCTG TATAGCCGGA ATCTCAAGTA TTCTTGTTCT TTCCAGCCTG
TTAGGGCTTG ACGATACTAT AAGCAGATCT CTTGCTCCTA AATCCGTAAC TACTCCTATA
GGAATTGAAA TCTCAAAACA GATAGGCGGC CTGCCTGCAA TAACAGTAGC TGCAATCGTA
TTTACCGGAA TTATTGGTGC TATTTTGGGC CCGTTTATCT GTCGCTGCTT CCGAATAAAA
GATAAAGTTG CAGTCGGTGT TGCAATCGGC ACTTCATCTC ATGCACTTGG AACAACAAGA
GCAATAGAAC TTGGAGAAAC CGAAGGGGCA ATGAGCGGAC TTGCAATAGG GATCGCAGGC
TTAATTACGG TTTTTCTGGT TCCCATGTTG CTTTATGTCT TCGGGCTTAT AACTTGA
|
|---|
| Protein sequence | MQTDFLNGLV NMPLFGILLS LVAFQIGTLL YKKTQLSILN PLLVASVLVM VFLLFFGINY
ETYNLGGNYI SFFLGPATVV LAVPLYKKIQ LLKSNALPIL AGIIAGCIAG ISSILVLSSL
LGLDDTISRS LAPKSVTTPI GIEISKQIGG LPAITVAAIV FTGIIGAILG PFICRCFRIK
DKVAVGVAIG TSSHALGTTR AIELGETEGA MSGLAIGIAG LITVFLVPML LYVFGLIT
|
|---|
| |