| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3171 |
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| Symbol | |
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| ID | 3626860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4080763 |
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| End bp | 4082406 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637702010 |
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| Product | thermosome subunit |
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| Protein accession | YP_306635 |
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| Protein GI | 73670620 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000559701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAG GTGGCCAGCC AATCATAATA ATAGATCCTA AAAAAGAAGA GACAAAGGGA
AAAGAAGCGC TCAGCATGAA CATCGCGGCT GCAAAGGCAG TGGCCAGTAT AGTCAAAAGC
ACGCTTGGAC CGAGGGGAAT GGACAAGATG CTTGTCAATC CTATCGGGGA TATCACAATC
ACAAATGACG GTGCAACCAT TTTACATGAT ATGTCCATTG AGCACCCAGC AGCCAAGATG
GTGGCCGAAG TTGCAGAGTC ACTTGAAAGC TCGGCTGGGG ACGGGACTAC AAGTGCTGTC
GTATTCACAG GCAATCTGCT GGAAAAAGCA GAAGACCTTA TTGAGAGTGG AGTCCACCCG
ACAGTTGTTG TCAAGGGGTA CAGGCTTGCA GCCGAGAAGG CTGTTGAAAT TTTAGAGAGC
CTGGCAATCT CAACTGCCGA GAATGAAAAG GAGAAGCTTT TAGAAGTTGC CAAAACCTCT
ATTACGGGCA AAGCTTCTGA AAAGTACGGT CGTTTGATTG CGGAGCTCTG CGTGGATGCT
GCGCTCTCAA TTCGTGAAAG GGGAGTAGTT GACCTTAAAG ACGTTATTCT TTCAAAAGAT
GTCGGCGGCA AGATAGAAGA TACCGAATTT GTTGAAGGCA TTGTAATAGA CAAGGTCGCT
CTGGATAAAG AATTCCCTCT CAGAATTGAG AACCCTGCAA TTGCTTTGAT TGATGCCCCT
ATGGAGATCG CTAAGACCGC AAACAAAGCA AAACTTCAGA TAAACGCATA TGGTGATCTT
GAGGATTTTG TAAAACAGGA AGAAGAAGCC TTATTCGAAA TGGCAGACTA TATCATCAGA
GCAGGGGCAA ATGCGGTTTT CTGTTCCAAA GGCATGGATG ACAAGATTGC AGCCTACCTG
CAAAACCGGG GAATTTATGC AACCCGCAGG GTTAAGAACG AAGACATGCA GCACCTTGTA
GACGCCACAG GCGGCAGGCC TATCCGCAAT ATCAAAGAAC TGACCCAGAA AGAACTCGGG
CACGCCGGGC TTCTTGAACA GGACCGGGAC GGCGACCAGG GCAAGACCTA TCTCAGAGAG
TGTAAGGGTG CAAAATCCGT ATCCATTGTC ATCAAGGGCG GTACAGAACA CATAGTTGAC
AACCTTGAAC GCGCAATTGA CGATGCCCTC AGGGTAGTAA AATGTGCCAT AGAAGACGGC
AGGATAGTTG CAGGTGGCGG GGCTTCTGAG GTTGAAGTCG CACTTGAGCT TCGGGCATAT
GCTCCCGGTA TAGGTGGGCG TGAACAGATG GCAATCAGGG CTTTTGCAGA TGCTCTCGAA
GAAATCCCGA GGACAATTGC CAGAAACGCA GGTCTGGACG CTATCAACAC AATAGTGAAC
CTCAGGGCAA AGCATACCGA AAACAAAAAC GCAGGCCTGA ACGTCAATAC CGGTGCTGCT
GAAGATATGC TCAAAAAAGG CATTGTTGAT CCTCTCAGGG TTAAGGTCAA CTCTGTCAAA
GCCGGTTCTG AAGCCGCAGT GATGGTGCTT CGTGTGGATG ATATGCTTCG CGCACAGCGC
GCCGACATGC AGGACGTAAA ACCCGAGCAC ATGGCAAGCA CTTATGATGG CATGTCAGCT
CCTGCACTTA ATATGCGCAG GTAA
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| Protein sequence | MEKGGQPIII IDPKKEETKG KEALSMNIAA AKAVASIVKS TLGPRGMDKM LVNPIGDITI
TNDGATILHD MSIEHPAAKM VAEVAESLES SAGDGTTSAV VFTGNLLEKA EDLIESGVHP
TVVVKGYRLA AEKAVEILES LAISTAENEK EKLLEVAKTS ITGKASEKYG RLIAELCVDA
ALSIRERGVV DLKDVILSKD VGGKIEDTEF VEGIVIDKVA LDKEFPLRIE NPAIALIDAP
MEIAKTANKA KLQINAYGDL EDFVKQEEEA LFEMADYIIR AGANAVFCSK GMDDKIAAYL
QNRGIYATRR VKNEDMQHLV DATGGRPIRN IKELTQKELG HAGLLEQDRD GDQGKTYLRE
CKGAKSVSIV IKGGTEHIVD NLERAIDDAL RVVKCAIEDG RIVAGGGASE VEVALELRAY
APGIGGREQM AIRAFADALE EIPRTIARNA GLDAINTIVN LRAKHTENKN AGLNVNTGAA
EDMLKKGIVD PLRVKVNSVK AGSEAAVMVL RVDDMLRAQR ADMQDVKPEH MASTYDGMSA
PALNMRR
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