Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3171 |
Symbol | |
ID | 3626860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4080763 |
End bp | 4082406 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637702010 |
Product | thermosome subunit |
Protein accession | YP_306635 |
Protein GI | 73670620 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000559701 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAAAG GTGGCCAGCC AATCATAATA ATAGATCCTA AAAAAGAAGA GACAAAGGGA AAAGAAGCGC TCAGCATGAA CATCGCGGCT GCAAAGGCAG TGGCCAGTAT AGTCAAAAGC ACGCTTGGAC CGAGGGGAAT GGACAAGATG CTTGTCAATC CTATCGGGGA TATCACAATC ACAAATGACG GTGCAACCAT TTTACATGAT ATGTCCATTG AGCACCCAGC AGCCAAGATG GTGGCCGAAG TTGCAGAGTC ACTTGAAAGC TCGGCTGGGG ACGGGACTAC AAGTGCTGTC GTATTCACAG GCAATCTGCT GGAAAAAGCA GAAGACCTTA TTGAGAGTGG AGTCCACCCG ACAGTTGTTG TCAAGGGGTA CAGGCTTGCA GCCGAGAAGG CTGTTGAAAT TTTAGAGAGC CTGGCAATCT CAACTGCCGA GAATGAAAAG GAGAAGCTTT TAGAAGTTGC CAAAACCTCT ATTACGGGCA AAGCTTCTGA AAAGTACGGT CGTTTGATTG CGGAGCTCTG CGTGGATGCT GCGCTCTCAA TTCGTGAAAG GGGAGTAGTT GACCTTAAAG ACGTTATTCT TTCAAAAGAT GTCGGCGGCA AGATAGAAGA TACCGAATTT GTTGAAGGCA TTGTAATAGA CAAGGTCGCT CTGGATAAAG AATTCCCTCT CAGAATTGAG AACCCTGCAA TTGCTTTGAT TGATGCCCCT ATGGAGATCG CTAAGACCGC AAACAAAGCA AAACTTCAGA TAAACGCATA TGGTGATCTT GAGGATTTTG TAAAACAGGA AGAAGAAGCC TTATTCGAAA TGGCAGACTA TATCATCAGA GCAGGGGCAA ATGCGGTTTT CTGTTCCAAA GGCATGGATG ACAAGATTGC AGCCTACCTG CAAAACCGGG GAATTTATGC AACCCGCAGG GTTAAGAACG AAGACATGCA GCACCTTGTA GACGCCACAG GCGGCAGGCC TATCCGCAAT ATCAAAGAAC TGACCCAGAA AGAACTCGGG CACGCCGGGC TTCTTGAACA GGACCGGGAC GGCGACCAGG GCAAGACCTA TCTCAGAGAG TGTAAGGGTG CAAAATCCGT ATCCATTGTC ATCAAGGGCG GTACAGAACA CATAGTTGAC AACCTTGAAC GCGCAATTGA CGATGCCCTC AGGGTAGTAA AATGTGCCAT AGAAGACGGC AGGATAGTTG CAGGTGGCGG GGCTTCTGAG GTTGAAGTCG CACTTGAGCT TCGGGCATAT GCTCCCGGTA TAGGTGGGCG TGAACAGATG GCAATCAGGG CTTTTGCAGA TGCTCTCGAA GAAATCCCGA GGACAATTGC CAGAAACGCA GGTCTGGACG CTATCAACAC AATAGTGAAC CTCAGGGCAA AGCATACCGA AAACAAAAAC GCAGGCCTGA ACGTCAATAC CGGTGCTGCT GAAGATATGC TCAAAAAAGG CATTGTTGAT CCTCTCAGGG TTAAGGTCAA CTCTGTCAAA GCCGGTTCTG AAGCCGCAGT GATGGTGCTT CGTGTGGATG ATATGCTTCG CGCACAGCGC GCCGACATGC AGGACGTAAA ACCCGAGCAC ATGGCAAGCA CTTATGATGG CATGTCAGCT CCTGCACTTA ATATGCGCAG GTAA
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Protein sequence | MEKGGQPIII IDPKKEETKG KEALSMNIAA AKAVASIVKS TLGPRGMDKM LVNPIGDITI TNDGATILHD MSIEHPAAKM VAEVAESLES SAGDGTTSAV VFTGNLLEKA EDLIESGVHP TVVVKGYRLA AEKAVEILES LAISTAENEK EKLLEVAKTS ITGKASEKYG RLIAELCVDA ALSIRERGVV DLKDVILSKD VGGKIEDTEF VEGIVIDKVA LDKEFPLRIE NPAIALIDAP MEIAKTANKA KLQINAYGDL EDFVKQEEEA LFEMADYIIR AGANAVFCSK GMDDKIAAYL QNRGIYATRR VKNEDMQHLV DATGGRPIRN IKELTQKELG HAGLLEQDRD GDQGKTYLRE CKGAKSVSIV IKGGTEHIVD NLERAIDDAL RVVKCAIEDG RIVAGGGASE VEVALELRAY APGIGGREQM AIRAFADALE EIPRTIARNA GLDAINTIVN LRAKHTENKN AGLNVNTGAA EDMLKKGIVD PLRVKVNSVK AGSEAAVMVL RVDDMLRAQR ADMQDVKPEH MASTYDGMSA PALNMRR
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