| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3143 |
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| Symbol | |
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| ID | 3624378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4042517 |
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| End bp | 4044976 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637701983 |
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| Product | cell surface protein |
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| Protein accession | YP_306609 |
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| Protein GI | 73670594 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.302282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.566596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA CGGGAAAGTC GTATTCAATA GCTTTAGCTT CAGCAACCTT AATTTTTGTA
TTTTCAATTT TAATGTCATC CGTGGCGTCA GGGTCACAGG TAACGAGAAT TGGAAATGGA
ACTGATCCTA CTATTTATGG TAACAAGGTA GTATGGACAA GTGGGGGTGT TATTCACCTC
TATGATTTAA CCTCGAAAAC AGACACTACA GTTAGCTCTT CTGCAGCATC TCATCCAGCT
ATCTATGGCA ATGTAGTAGT GTGGCACGAT GAAAGTAATG GAATGCCAAG ACTAACAGTT
TATGACATTA AAACTGCTGG CAGATCTTAC ATTACTAAAG ATGTAGACAA CAGGAGCATC
CCTGCTATTT ACGATAACAG AATCGTTTGG AGTGCTTACA ATGAATCAAC TCATAATCCC
AGCATATATA TGAGGGATAT CTCTAATTCA ACACAAACCT GGATAGCAGA AGGAGAAGGA
TATTCATCGG ATATATACGG CACGAAAATA GTGTACTCAG CCGAAGGTAG AAGTATGAGA
GACATCTTTT TGTATGATAT AACTACCAAG AAAACCATAA CAGTAAGCCC GTATTCAGGT
TCTATTCAAA TTCCACATAT GTATGGCAAT AAAGTAATTT GGGTAGACAA TTACATAGGA
AGTGGATATA TTGGCATGTA CGACGTTGTT ACTAAAAAAG CAACAAAGGT TACAAGTGAC
CATACAGTTA ATACCTTGAA TGGATCCGAG GGTCTTGAGA CTGGCTGTGA TACCGGTACT
CATTTTGATA TAAATGGGGA CAAAATCGTA TATTCAAAAT CTGCCGATAA CCAATTTGGT
TATGCAGGTG TATACGTTTA TGATATTCCT TCAGCAAAAA GTACTCCAGT CTATATTTAT
CCAAGAGGGG CTGACACAAC ACCTGATATC TACAACGATA CTATCGTATG GGGAATAGAC
GGTGATCATG GTGGATATGG TGGGGTTAAT GATACTGGCA TCTATATTTG TGATCTTTCT
GTCACAAACA CCTTGCCACC TGTAGCTGAA TTTACTGCAA ACAGAACCTA TGGAGCTGCA
CCTCTAGTTG TGTTATTCAC CGATACCAGC ACTGGCGAAG TACCGACTTC CTGGATTTGG
GATTTTGGGG ACTGGACTTA CTCAAAACAT GCCATGAATG CAACCTACAC GTTTACAAAA
CCAGAGAATT ATACAATCAG TCTGACTGCA GGAAATGACG CAGGTAGTAA TAAAGTAGTG
AAGCCAAATT ACATAGTCGT TACTAATCCA TTTCTAGTTG CAAACTTCAG TAGCAACGTT
ACCCATGGTT ATCCTCTTCT CTCAGTTCAG TTTACTGACC TCTCACAAAA TGCAACTGGA
TGGAACTGGG ATTTTGGAGA TGGAAGTAAT TCTACACAAA GAAGTCCAGT TCATGAATAT
GCAGATCCAG GAATCTATTC AGTTAATCTG ACAGCAACCA ATGAGAACGG TACAGATTCA
AAGTTAACTA CAATAACAGT AATGCAGCTA GTCGGTGTAG GTCCATATGC ATATATTACG
AACTCCGGCG ACAACAATAT TTCAGTAATT GACACGGCTA CTAACAAGGT TACAGCCATG
ATTCCTGTAG GAAGTCAACT TGGTGGAGTT GCTATTACAC TTGATGGAAA AAAGGTATAT
GTGACAAATT ATTACAATAT ATCTGTAATT GACGCAACAA AAAACAAAGT TACAGCCACA
ATTCCTGTAG GAAACTATCC TAGTGGAGTT GCAGTTTCTC CTGATGGAAA AAGGATATAT
GTGCCAAATC CCGATTTTGG AAATCCCAGC AACAACACGA TCCTCATTAT AAACACAGAT
ACCAACGAGG TTGAAGCTAC AGTACTTGTA GGCGAATTTC CTTTTGGAGT TGCCGTTACA
CTGGACGGGA AAAAGGTGTA TGTGACTAAT CTCGATGACA AAACTGTCTC TGTAATTGAC
ACTTCAACAA ACACTGTTAT AGCCACAATT CCTGTAGGAG ACTATCCTCG TGGAGTTGCA
ATAAGTCCGG ATGGGAAAAG GGTATATGTG ACTAATAGTG GCAGCAATAG CGTTTCTATA
ATTAACACTG ACGCAAACAC TGTTACAGCC ACTGTGCCTG TTGGAAACTG GCCAAAAAGT
ATTGCAGTCA CTCCAGATGG AAAAAAGGTA TATGTGGCGA ACTATGGCAG CATTAGTACT
CCTGATGATA CTGTTTCTGT AATTGATATA GCTACTAACA TGGTTACAGC TACGGTACAT
GTAGGAAGTT ATCCTTCTGG AGTTGCAGTC ACACCGGATG GATCAAGGGT ATATGTGGCT
AATCAGCGCA GTGATAATGT CTCTATAATT GACACCGCAA CAAACAAAGT TACAGCAACT
ATGAATGTAG GACGTGGTCC TAATTCCTTT GGGCAGTTTA TAGGTTCTCT TCAAGCATAA
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| Protein sequence | MKDTGKSYSI ALASATLIFV FSILMSSVAS GSQVTRIGNG TDPTIYGNKV VWTSGGVIHL
YDLTSKTDTT VSSSAASHPA IYGNVVVWHD ESNGMPRLTV YDIKTAGRSY ITKDVDNRSI
PAIYDNRIVW SAYNESTHNP SIYMRDISNS TQTWIAEGEG YSSDIYGTKI VYSAEGRSMR
DIFLYDITTK KTITVSPYSG SIQIPHMYGN KVIWVDNYIG SGYIGMYDVV TKKATKVTSD
HTVNTLNGSE GLETGCDTGT HFDINGDKIV YSKSADNQFG YAGVYVYDIP SAKSTPVYIY
PRGADTTPDI YNDTIVWGID GDHGGYGGVN DTGIYICDLS VTNTLPPVAE FTANRTYGAA
PLVVLFTDTS TGEVPTSWIW DFGDWTYSKH AMNATYTFTK PENYTISLTA GNDAGSNKVV
KPNYIVVTNP FLVANFSSNV THGYPLLSVQ FTDLSQNATG WNWDFGDGSN STQRSPVHEY
ADPGIYSVNL TATNENGTDS KLTTITVMQL VGVGPYAYIT NSGDNNISVI DTATNKVTAM
IPVGSQLGGV AITLDGKKVY VTNYYNISVI DATKNKVTAT IPVGNYPSGV AVSPDGKRIY
VPNPDFGNPS NNTILIINTD TNEVEATVLV GEFPFGVAVT LDGKKVYVTN LDDKTVSVID
TSTNTVIATI PVGDYPRGVA ISPDGKRVYV TNSGSNSVSI INTDANTVTA TVPVGNWPKS
IAVTPDGKKV YVANYGSIST PDDTVSVIDI ATNMVTATVH VGSYPSGVAV TPDGSRVYVA
NQRSDNVSII DTATNKVTAT MNVGRGPNSF GQFIGSLQA
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