Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3142 |
Symbol | |
ID | 3624376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4041205 |
End bp | 4041960 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637701981 |
Product | metal dependent hydrolase |
Protein accession | YP_306608 |
Protein GI | 73670593 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.961345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.361163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTA CATTTCTTGG CACTGGAGTT GCAATCCCTC AGAAAAATAG GGTACAGTCC GGAATTCTTG TAAGGCTAGA AGAAAAGCCA TTGCTTATTG ATTGCGGAAG CGGCGTATTG AACCGGTTTC CTGAGGCTGG GGTTTCTCAC ACTGAGGTGG ACACAGTGTT GCTTTCTCAC CTTCACCTTG ACCACGTAGC TGACCTACAC CCTCTTATCA AGGCAAACTG GCTCCGCGGA AACACGAGTA TGAAGGTCTA CGGGCCTGAA GGGACCGAAG AATGGTTTTC AAAAGTGATT GACGCTTATG AATATCTTCA GGAAGAAGTG GACGTAGACG TTATTGAGCT CACTCCCGGA AAAGAATTTA CTCCCGAGGG ATTCGATTGT GAGATCAGCT GCACGGCAGC CTCTCACAGC GTTCCGACAC TGGCTTACCG CGTGACTGGA GAGGACGGAG AATTCGTTTA CTCCGCAGAC ACCGAGCCTT CCAGGGATGT AATGGACCTT GCAGCCGGGG CCGACCTCTT GATCCACGAA TGTTCGTTTC CATCAGACAT GAATGTCACA AATCATACCA CTCCCAGCTC ACTTGCCGAC ATCCTGGAGG AATATAATAA CGAAATCGGA AGCATCTGCC TTACACATTT CTATCCGGAA ATGCGGGGAC ACGAAAGAGA AGCAGTGCAC CGCCTGAAAG GGTATTTTGA AGGAGAAGTG ATTCTTGCCG AAGACCTCAT GAAACTTGAA TTATGA
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Protein sequence | MEITFLGTGV AIPQKNRVQS GILVRLEEKP LLIDCGSGVL NRFPEAGVSH TEVDTVLLSH LHLDHVADLH PLIKANWLRG NTSMKVYGPE GTEEWFSKVI DAYEYLQEEV DVDVIELTPG KEFTPEGFDC EISCTAASHS VPTLAYRVTG EDGEFVYSAD TEPSRDVMDL AAGADLLIHE CSFPSDMNVT NHTTPSSLAD ILEEYNNEIG SICLTHFYPE MRGHEREAVH RLKGYFEGEV ILAEDLMKLE L
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