Gene Mbar_A3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3142 
Symbol 
ID3624376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4041205 
End bp4041960 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content49% 
IMG OID637701981 
Productmetal dependent hydrolase 
Protein accessionYP_306608 
Protein GI73670593 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.961345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.361163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTA CATTTCTTGG CACTGGAGTT GCAATCCCTC AGAAAAATAG GGTACAGTCC 
GGAATTCTTG TAAGGCTAGA AGAAAAGCCA TTGCTTATTG ATTGCGGAAG CGGCGTATTG
AACCGGTTTC CTGAGGCTGG GGTTTCTCAC ACTGAGGTGG ACACAGTGTT GCTTTCTCAC
CTTCACCTTG ACCACGTAGC TGACCTACAC CCTCTTATCA AGGCAAACTG GCTCCGCGGA
AACACGAGTA TGAAGGTCTA CGGGCCTGAA GGGACCGAAG AATGGTTTTC AAAAGTGATT
GACGCTTATG AATATCTTCA GGAAGAAGTG GACGTAGACG TTATTGAGCT CACTCCCGGA
AAAGAATTTA CTCCCGAGGG ATTCGATTGT GAGATCAGCT GCACGGCAGC CTCTCACAGC
GTTCCGACAC TGGCTTACCG CGTGACTGGA GAGGACGGAG AATTCGTTTA CTCCGCAGAC
ACCGAGCCTT CCAGGGATGT AATGGACCTT GCAGCCGGGG CCGACCTCTT GATCCACGAA
TGTTCGTTTC CATCAGACAT GAATGTCACA AATCATACCA CTCCCAGCTC ACTTGCCGAC
ATCCTGGAGG AATATAATAA CGAAATCGGA AGCATCTGCC TTACACATTT CTATCCGGAA
ATGCGGGGAC ACGAAAGAGA AGCAGTGCAC CGCCTGAAAG GGTATTTTGA AGGAGAAGTG
ATTCTTGCCG AAGACCTCAT GAAACTTGAA TTATGA
 
Protein sequence
MEITFLGTGV AIPQKNRVQS GILVRLEEKP LLIDCGSGVL NRFPEAGVSH TEVDTVLLSH 
LHLDHVADLH PLIKANWLRG NTSMKVYGPE GTEEWFSKVI DAYEYLQEEV DVDVIELTPG
KEFTPEGFDC EISCTAASHS VPTLAYRVTG EDGEFVYSAD TEPSRDVMDL AAGADLLIHE
CSFPSDMNVT NHTTPSSLAD ILEEYNNEIG SICLTHFYPE MRGHEREAVH RLKGYFEGEV
ILAEDLMKLE L