Gene Mbar_A3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3102 
Symbol 
ID3625310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3990826 
End bp3991515 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content44% 
IMG OID637701939 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_306569 
Protein GI73670554 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR03306] alternate F1F0 ATPase, F0 subunit A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00224256 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.218622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTA GTCCTGATGA GCTGATTTTC TGGCAGTACG ACTTTATCAA ACTCAATGCC 
ACAATTGTAT ACACCTGGGG GTTGATGCTG GTAATGGTAA TTGGTTCAAA AACTATTACA
AGCAAACTCT CTACTGGTCT GGAACGTTCC CGCTGGCAAA ATATTCTGGA AATCATTGTC
ACAGGCATCC TGGAACAAAT TGAGGATGTT GGCCTGGATC AGCCAAGGAA ATATCTAGGC
TTTTTAGGCA CGCTCTTTCT GTTAATCGCT GTAGCCAATC TCTGCATCAT AATTCCAGGC
TATGAACCGC CAACAGGATC CCTTTCAACT ACGGCTGCTC TTGCATTATG CGTGTTTGTA
GCTGTTCCAC TTTTCGGCAT CGAAGAACAA GGAGTTAGTA ACTACCTTAA GACGTACACA
GAGCCGACAA TTATCATGCT GCCATTTAAT ATTATAAGTG AAATCTCCCG CACGTTAGCT
CTTGCAATCC GTCTGTTCGG CAACATCATG AGCGGCTCGA TGATCGTTGC CATTCTGCTG
ACAATTACAC CATTCATCTT TCCGGATCTC ATGATTGTTC TTGGTCTGCT CGTTGGTATG
GTGCAAGCCT ACATCTTCAG CGTTCTGGCC ACAGTTTACA TAGCAGCTGC TACGCGAACC
AGTAAATCCA GAAGTGAAAC TGGACAATAA
 
Protein sequence
MRLSPDELIF WQYDFIKLNA TIVYTWGLML VMVIGSKTIT SKLSTGLERS RWQNILEIIV 
TGILEQIEDV GLDQPRKYLG FLGTLFLLIA VANLCIIIPG YEPPTGSLST TAALALCVFV
AVPLFGIEEQ GVSNYLKTYT EPTIIMLPFN IISEISRTLA LAIRLFGNIM SGSMIVAILL
TITPFIFPDL MIVLGLLVGM VQAYIFSVLA TVYIAAATRT SKSRSETGQ