Gene Mbar_A3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3072 
Symbol 
ID3625083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3953926 
End bp3954429 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID637701912 
Producthypothetical protein 
Protein accessionYP_306542 
Protein GI73670527 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.328618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTT TAACAGTTTT GAAATTTGAA GCTACCGATG GCGCCCAAAA AGCGCTTCAC 
GTGGTTGAGG ACTTAAGCAA GAAACAATTG ATCAACCTGC ATGACGCAGC CATAGTTACC
TGGCCTGAGG GGAAAAAGAA GCCAAAAACA GAGCAACTGC ACAATTTAGC AGGTGTAGGC
GCATTGAGTG GAGCTTTTTG GGGTATGCTT TTTGGCCTGA TTTTTTTTGT TCCTATACTT
GGTCTGGTTG TTGGGGCAGC AATGGGCGCA CTTGCAGGTT CCATGTCTCA TGTGGGTATC
AATGAGGATT TTATAAAGTC AGTGCGCAGC AAAGTGACTG AAGGCACTTC AGCTCTCTTT
TTGATGACCA GTGATGTTGT AGAAGATAGA GTCGCAGATG CCATGAAACA GCTCAAGTTT
GAAATCATTG CTACCAACCT ATCCGCAGAA GAAGAGAAAA AACTGCATGA GACATTCGTT
GAAGAAGAAG CAGCTCCAGC ATGA
 
Protein sequence
MATLTVLKFE ATDGAQKALH VVEDLSKKQL INLHDAAIVT WPEGKKKPKT EQLHNLAGVG 
ALSGAFWGML FGLIFFVPIL GLVVGAAMGA LAGSMSHVGI NEDFIKSVRS KVTEGTSALF
LMTSDVVEDR VADAMKQLKF EIIATNLSAE EEKKLHETFV EEEAAPA