Gene Mbar_A3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3069 
Symbol 
ID3625080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3949458 
End bp3949964 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID637701909 
Producthypothetical protein 
Protein accessionYP_306539 
Protein GI73670524 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.17224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.666956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTT TAACAGTTCT GAAGTTTGAT GCCGCTGACG GCGCCCAAAA AGCGCTTCAT 
GTGGTTGAAG ATTTAAGCAA GAGACAATTG ATCAATCTGC ATGATGCAGC CATAGTTACC
TGGCCTGAGG GGAAAAAGAA GCCAAAAACA GAGCAACTGC GCAATTTAAC AGGTGCAGGT
GCACTGAGCG GCGCTTTTTG GGGTATGCTG TTTGGCCTGA TTTTCTTTAT TCCTATATTT
GGTCTGGTCG TTGGGGCTAC ACTGGGTGCA CTGACAGGTT CAATGGCCGA TATAGGAATT
AGTGACGATT TCATAAGATC AGTACGCAGC AAAGTAACAG AAGGCACATC GGCCCTTTTC
TTGATGACCA GTGATGCTGT ACAGGATAAG GTGGCAGAAG CTGCCAGGGG AATGAATTTT
GAACTCATTG CCTCCAACCT GTCAAAAGAA GAAGAAGACA AACTGCGTGC TGCCTTTGCC
GAAGAAGAAG CAGCTCCAGC ATACTGA
 
Protein sequence
MATLTVLKFD AADGAQKALH VVEDLSKRQL INLHDAAIVT WPEGKKKPKT EQLRNLTGAG 
ALSGAFWGML FGLIFFIPIF GLVVGATLGA LTGSMADIGI SDDFIRSVRS KVTEGTSALF
LMTSDAVQDK VAEAARGMNF ELIASNLSKE EEDKLRAAFA EEEAAPAY