| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3057 |
|---|
| Symbol | |
|---|
| ID | 3625068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3936014 |
|---|
| End bp | 3936487 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637701898 |
|---|
| Product | dCMP deaminase |
|---|
| Protein accession | YP_306528 |
|---|
| Protein GI | 73670513 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.876762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.403626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA ATGATTTTTT ATTTATGAAA CGGGCAATCG AACTTTCCCT TGAGAATGTC
AAGAAAGGAG GAGGCCCTTT TGGGGCAGTA ATCGTCAGAA ACGGGGAAAT CCTTGCAGAG
AGCTGCAACA TGGTTACTGC ACTTAATGAC CCTACGGCCC ATGCCGAGAT AAATGTAATA
AGAGAAGCAG CCCGGAAACT CGAGACTTTT GATCTCAGCG GCTGTACTAT CTATGCTTCC
TGTGAGCCCT GCCCAATGTG CCTTGGGGCA ATTTATTGGG CCAGAATTGG TAAAGTCGTT
TTTGCCAATA CAGCATCTGA CGCTCAAAAA ATTGGCTTTG CAGATTCTCT TATTTATAGT
GAGATCGCAC GCCCTCTTCA GGAGAGAAAT ATAGAGTTCC GGCAGCTCCT AAGGAAAGAG
GCCTTGAAGG CTTTTAAAGC ATGGGAAGAG TCCGAGAATA AGATAGATTA CTGA
|
|---|
| Protein sequence | MSDNDFLFMK RAIELSLENV KKGGGPFGAV IVRNGEILAE SCNMVTALND PTAHAEINVI
REAARKLETF DLSGCTIYAS CEPCPMCLGA IYWARIGKVV FANTASDAQK IGFADSLIYS
EIARPLQERN IEFRQLLRKE ALKAFKAWEE SENKIDY
|
|---|
| |