| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3010 |
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| Symbol | |
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| ID | 3626672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3874245 |
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| End bp | 3875489 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701854 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_306484 |
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| Protein GI | 73670469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0102949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00186023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACAAT CAACCTACCT GAAAATGGGT CTGAACATGC TTGTGCATAG CAAGCTCCGA
AGCTGGCTGA CTATTATTGG AATAGTTATA GGGATCGGAT CTGTTGTCGG CATCCTCTCC
CTTGGAGATG CTATGCAGGA GCAAGTGCAG AGCAGGCTCG CCGAAATGGA TCTGACGAAA
ATAACCATAA GTCCAGGGTA TACTAAAGCG TCATCCAACA TGCCTGGCCC TTCTGGGATG
AGAGGTTCAT CAACAGATGT TGAATTGACA GATGACGACA TCGAGGCTCT CCAGGGTCTG
GATGGGATAC AGTACATAGC TGGCCAGATC TCAGGTAGCG AATCAGTTAT TTACGCAGCG
CAAAATGCAA CTCTCTCAAT TACAGGTGTG GACCCTCAGG TCTGGAAGTA CATGACTACC
CTGAAAACAC AATCCGGAAG ATTGCTTGAA CCGGCTGATA AATATGTTGC GGTTATAGGA
AGCGGGGTTG CAAGTGGAGT TTATGACCAG GAAATTGGGG TCAACCAGGT AATAACTGTA
AACGCTAAAG CCGTGCGAGT TGTTGGTATC CTGGAAGAAG AAGGTGGACG TGGAGACCGA
AGCATTTACA TGCCGATCGA TGGGGCAGTA AACCTGCTTG ATGACGCCGA AGAAGGTGTT
TATGATAGTA TCACGGTGAA AGCAAAGAGT GAAGACCTGG TTGATGAGCT GATGGAAAAT
ATCGTGGATA AGCTCATGGT TTCAAGACAC ATTATTCAGG AAGATGACAG AGACTTTTCC
GTGACAGCTT CTAAATCGAT GGCTGAGTCT GTTACCGAAA TGACGAGTTC AATGACTCTG
TTTCTTGGAG CTATTGCAGC CGTATCCCTG CTTGTAGGAG CCGTTGGGAT TGCCAATACC
ATGTTCACAT CTGTCCTTGA AAAGACAAAG GAGATCGGAA CTATGAAAGC CATTGGGGCA
AAAAACAGGG ATATCCTTAT GATTTTTCTC TTTAATTCCG CAATGGTTGG CCTTGTTGGT
GGTATCCTTG GAGATATTCT GGGGGCTTTT GTTTCAACTC TTTTCCCTAT GCTTGGCATG
ACTATGATGA GAGGGAGAGG TTCAGGTTCT TCAGGCATAT ATCTTGCTCC TGACCTGATG
GCTTTTGGGC TTCTTCTGGC AGTTTTAATA GGGGTGATAT CAGGAGTGGT CCCTGCGTAC
AGAGCTTCAA AGTTAAAACC AGTAGACGCT TTGAGGTACG AATGA
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| Protein sequence | MRQSTYLKMG LNMLVHSKLR SWLTIIGIVI GIGSVVGILS LGDAMQEQVQ SRLAEMDLTK
ITISPGYTKA SSNMPGPSGM RGSSTDVELT DDDIEALQGL DGIQYIAGQI SGSESVIYAA
QNATLSITGV DPQVWKYMTT LKTQSGRLLE PADKYVAVIG SGVASGVYDQ EIGVNQVITV
NAKAVRVVGI LEEEGGRGDR SIYMPIDGAV NLLDDAEEGV YDSITVKAKS EDLVDELMEN
IVDKLMVSRH IIQEDDRDFS VTASKSMAES VTEMTSSMTL FLGAIAAVSL LVGAVGIANT
MFTSVLEKTK EIGTMKAIGA KNRDILMIFL FNSAMVGLVG GILGDILGAF VSTLFPMLGM
TMMRGRGSGS SGIYLAPDLM AFGLLLAVLI GVISGVVPAY RASKLKPVDA LRYE
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