Gene Mbar_A3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3000 
Symbol 
ID3626662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3863680 
End bp3864120 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content43% 
IMG OID637701844 
Producthypothetical protein 
Protein accessionYP_306474 
Protein GI73670459 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.225555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000458503 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAGAAA AGCTTAAAGA TAAGATTTAC GAGTACCTTT CAGATCATTA CTACCTGAAC 
CTTGCAACCG TAAGTCCGCA GGGCAGGCCA ATGGCCCATA CAATGGCATA TGTATCTAAA
GGCGCTACCG TATACGTGGC AACCAATAAG AATACCCGAA AAGTCCAGAA TATTGTGCAA
AACCCTCATG TAGCATATAC TATCGATGAG GATGATCCAG ATTGGTTTGA GATACAGGCC
CTTCAGATTG AAGGCAAGGC ATCAATAGTT ACTGATGAAA GTGAATTACG AGAAGTAGGG
GAAATAATGG TAGCCAAATT TCCGGTTGCT GCAGACATGC CCCCTGACCC GGAGAGTATC
ATGATAAAAA TTGAGCCAGA AGTTATCTAT TACCTCGATT ACAGTGTTAA TTTCGGGTAC
AGGGAACGGG TGAATCTATG A
 
Protein sequence
MAEKLKDKIY EYLSDHYYLN LATVSPQGRP MAHTMAYVSK GATVYVATNK NTRKVQNIVQ 
NPHVAYTIDE DDPDWFEIQA LQIEGKASIV TDESELREVG EIMVAKFPVA ADMPPDPESI
MIKIEPEVIY YLDYSVNFGY RERVNL