Gene Mbar_A2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2989 
Symbol 
ID3626632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3850000 
End bp3850689 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID637701834 
Producthypothetical protein 
Protein accessionYP_306464 
Protein GI73670449 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.721184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0157229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC ACGTTATCCA GCACTCTTCC ATAAATACCC TCGGCACCAT TGAAGAGTAT 
GCAAAAGATA AAAACTGCAG GCTTGCATCA ACTCGCTTTT ACGAAACTAA AAGCCCTCCA
GAACTTGATT CTTTTGACCT TCTTATAATC ATGGGTGGCT CGATTGGAGT TTACGACTAT
AAAGAAAATC CCTGGCTGAG AGATGAAAAG GCGTTTATCA AGCAGGCAAT CGAAGCAGGA
AAACCTATAC TGGGAATCTG CCTCGGTGCA CAATTGCTTG CCGATATCCT TGGGGCTCGC
GTATATGAAA ACAGGCACAT GGAAATGGGC TGGTTTCCTG TAAGGGCATT TGGAGGTGAG
AATAAGCCGG AATTTCTTGA AGGGCTGCCG GACGAGATCA CAGTTTTTCA CTGGCATTCC
AGGACTTTTG ACTTGCCGGT GGGAGCTGTT CAGCTTTTTG AAAGTGAAGG CTGTAAGAAT
CAGGCTTTTA TCTACAATGG CAGGATTGTC GCGCTTCAAT TTCATCCTGA AGTAAATGAA
GAAAGAATTC TGAGTTTGAT CAAGCGGTTT GGGGATGGGA TGGCAAGTGG ACTATTTGTG
CAGAAAAGAA GGGAAATGAT CGGGCAGAAA GAATATCTGG ATGCTACAAA GGAATTTATG
TTTTTGATTT TGAATAAATT AAAAAACTGA
 
Protein sequence
MNIHVIQHSS INTLGTIEEY AKDKNCRLAS TRFYETKSPP ELDSFDLLII MGGSIGVYDY 
KENPWLRDEK AFIKQAIEAG KPILGICLGA QLLADILGAR VYENRHMEMG WFPVRAFGGE
NKPEFLEGLP DEITVFHWHS RTFDLPVGAV QLFESEGCKN QAFIYNGRIV ALQFHPEVNE
ERILSLIKRF GDGMASGLFV QKRREMIGQK EYLDATKEFM FLILNKLKN