Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2989 |
Symbol | |
ID | 3626632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3850000 |
End bp | 3850689 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701834 |
Product | hypothetical protein |
Protein accession | YP_306464 |
Protein GI | 73670449 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.721184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0157229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCC ACGTTATCCA GCACTCTTCC ATAAATACCC TCGGCACCAT TGAAGAGTAT GCAAAAGATA AAAACTGCAG GCTTGCATCA ACTCGCTTTT ACGAAACTAA AAGCCCTCCA GAACTTGATT CTTTTGACCT TCTTATAATC ATGGGTGGCT CGATTGGAGT TTACGACTAT AAAGAAAATC CCTGGCTGAG AGATGAAAAG GCGTTTATCA AGCAGGCAAT CGAAGCAGGA AAACCTATAC TGGGAATCTG CCTCGGTGCA CAATTGCTTG CCGATATCCT TGGGGCTCGC GTATATGAAA ACAGGCACAT GGAAATGGGC TGGTTTCCTG TAAGGGCATT TGGAGGTGAG AATAAGCCGG AATTTCTTGA AGGGCTGCCG GACGAGATCA CAGTTTTTCA CTGGCATTCC AGGACTTTTG ACTTGCCGGT GGGAGCTGTT CAGCTTTTTG AAAGTGAAGG CTGTAAGAAT CAGGCTTTTA TCTACAATGG CAGGATTGTC GCGCTTCAAT TTCATCCTGA AGTAAATGAA GAAAGAATTC TGAGTTTGAT CAAGCGGTTT GGGGATGGGA TGGCAAGTGG ACTATTTGTG CAGAAAAGAA GGGAAATGAT CGGGCAGAAA GAATATCTGG ATGCTACAAA GGAATTTATG TTTTTGATTT TGAATAAATT AAAAAACTGA
|
Protein sequence | MNIHVIQHSS INTLGTIEEY AKDKNCRLAS TRFYETKSPP ELDSFDLLII MGGSIGVYDY KENPWLRDEK AFIKQAIEAG KPILGICLGA QLLADILGAR VYENRHMEMG WFPVRAFGGE NKPEFLEGLP DEITVFHWHS RTFDLPVGAV QLFESEGCKN QAFIYNGRIV ALQFHPEVNE ERILSLIKRF GDGMASGLFV QKRREMIGQK EYLDATKEFM FLILNKLKN
|
| |