| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2933 |
|---|
| Symbol | |
|---|
| ID | 3626518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3758643 |
|---|
| End bp | 3760355 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637701778 |
|---|
| Product | hydantoinase/oxoprolinase |
|---|
| Protein accession | YP_306408 |
|---|
| Protein GI | 73670393 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0177705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATAG GAATTGATGT CGGAGGCACT ACCACGGATG CAGTGCTTAT CCAGAATGGA
GAAGTGTACA GTACTGCCAA GGTTTCCACT GAACACGGAA ATCTACTAAA TTCACTGCTT
GAGGCCCTTG ATGCTGTCAG CAAAGATGTC CCTCCTGAGC AGCTGGAAAG AGTAGTGTTC
AGTACAACCG TGATAACAAA TCTCATTGCC GAAGGCAAAA CTGACCGTGT AGCCCTGGTA
TTAATTCCAG GACCCGGGGT TAACCCGGCA AGCTATACCT TTCCTGACAG CTTTTATCTA
AAAGGGGCTA TGGATTACAG GGGAAGGGAA ATCGATCCCC TCGATGAGGC TGAGATCAGG
AGAACTGTAG GTTCGGTCCA GGAGTCTGGA TTTTCAAGAG CAGCCATTAT AAGTAAGTTC
GGGCAGAGGA ACCCTTCCCA TGAACTTAGG ATAGAGGAGA TTTTCAGGGA GATCTATCCT
GACTGTAAAC TGGAACTTGG GCATAAGGTT TCGGGAAAAC TGAACTTCCC AAGAAGAATA
GCAACTGCAA TGCTTGCTTC TGCCACCAGG GAGCGCTATC AGGAGTTCGT TGAGAAAATC
AAGAGAGCCC TTGAGGAGAG AAACATCAGG GCTCCTGTGT ATATCCTGAA AGCCGATGGA
GGAACTCTAC CAGTTGATAA ATCGATAGAG TTCCCTGTGG AAACTATCTT TTCGGGTCCT
GCTGCCAGCA CAATTGGAGC TCTTGCCCTT ACACCTGAAG GGCAGACCTC AGTGGTAGTA
GATATAGGAG GGACTACCAC AGACCTTGCG TTAATTCTGT CAGGCAAGCC TCTTTTTGCT
TCCAAAGGCG CAAAACTCGG AGATTTCCTT ACACATGTCA GAGCTTTTGC AGTCCGCTCG
ATAGCTGTAG GAGGAGACAG TGTTGTAAGG GTTAAAGACC TGAACTCCGG CACAAAACAG
ATAACAATCG GCCCTGATAG ATCCGGCCCG GCTTATTGCA TGGGAGGAAA AGAAACTACT
CCCACAGATG CCCTGAAGTT CCTCGGGCTT ATTGAGGTAG GAAATCCCGA ACGTGCAAGC
GAGGCGATCA AAGCTACAGC TTCTAAGCTT GGAAAATCAG AAACTGAAAC TGCATCTCTG
ATTGTAGATA GAGTTGCACA GATGATTGCT GATGCGGTAA ATGAGATGTT TTTTGAATGG
GAACAGGAGC CTGCCTATCG GGTATGGGAG GTCCTGCAAG AGAAAAAGGC AAGGCCTGAA
AATGTAGTTG GAATCGGAGG GGGTGCGAAG GGGCTTATTG CAGAGATTGC GAAAAAACTT
AATGCAAGCC CTGTTATTCC CGAACACGCC GAGGTAGGAA ATGCCATAGG GGCAGCCGTT
GCAAGGCCCA CGATTACTCT GAACCTGCAC ATTGATACTG AACAGAAAGT TTACTCTGTT
GCCGAGGAAG GGGAGATTGT CAGTCTAAAC ACAACAAAGT TCAGGAACTT GAATAAAATC
AGCCTCGATG AAGCTGAAAC CCTGGCAGCA GAACTCTTGA GAGGACGTGC GGAAGACTTC
GGAATTTCCG AGTATGCAGA TGAAGCCGAG ATTGTTAATA GTGATGTCTT CAATGTCGTC
AATGGTTGGT ATACTACAGG GCGGCTTTTT GACGTAAACA TGCAGATTCC TGCAGGCCTG
ATTCCTGAAT GGAAAAGGAG GGAAAAAGCA TGA
|
|---|
| Protein sequence | MLIGIDVGGT TTDAVLIQNG EVYSTAKVST EHGNLLNSLL EALDAVSKDV PPEQLERVVF
STTVITNLIA EGKTDRVALV LIPGPGVNPA SYTFPDSFYL KGAMDYRGRE IDPLDEAEIR
RTVGSVQESG FSRAAIISKF GQRNPSHELR IEEIFREIYP DCKLELGHKV SGKLNFPRRI
ATAMLASATR ERYQEFVEKI KRALEERNIR APVYILKADG GTLPVDKSIE FPVETIFSGP
AASTIGALAL TPEGQTSVVV DIGGTTTDLA LILSGKPLFA SKGAKLGDFL THVRAFAVRS
IAVGGDSVVR VKDLNSGTKQ ITIGPDRSGP AYCMGGKETT PTDALKFLGL IEVGNPERAS
EAIKATASKL GKSETETASL IVDRVAQMIA DAVNEMFFEW EQEPAYRVWE VLQEKKARPE
NVVGIGGGAK GLIAEIAKKL NASPVIPEHA EVGNAIGAAV ARPTITLNLH IDTEQKVYSV
AEEGEIVSLN TTKFRNLNKI SLDEAETLAA ELLRGRAEDF GISEYADEAE IVNSDVFNVV
NGWYTTGRLF DVNMQIPAGL IPEWKRREKA
|
|---|
| |