Gene Mbar_A2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2872 
Symbol 
ID3627253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3677597 
End bp3678898 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content49% 
IMG OID637701722 
Productphenylacetate-CoA ligase 
Protein accessionYP_306352 
Protein GI73670337 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0742777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0504153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACT GGCAGCCTAA ATACGAAACA ATGAGTCCCG AAGAACTGAA GAAATTACAG 
CTAAAACGCC TTCAACACAG CGTAAAGCTG GTCTATGACA ATGTTCCTTT TTACAGGCAA
AATTACAAAG CAGCCGGAGT TACTCCCGAA GACATCAAGA CCCTCGAAGA TGTCCGTAAA
TTGCCTTTCA CGCGGAAAAC CGACCTTCGG GACAACTATC CTTTCGGGCT TTTCGCTGCC
AAAAAAGAAG ACATAGTGCG TATCCACGCC TCGTCAGGAA CAAGTGGGAA ACCCACAGTC
GTCGGGTACA CGGCAAAAGA TATTGAGACC TGGTCTGATC TGATTGCCCG TGACCTCACA
ATGATTGGGC TTTCAAAAGG CGATACCATT CAGAATTCCA TGAATTACGG GCTCTTTACC
GGAGGCATAG GTTTTCACTA CGGTGTAGAA AGAATGGGCG CAATGGTCGT GCCAGCCGCA
ACCGGAAATA CCGCCAGGCA GCTTGAGATG ATGATCGACT TCGGCGTAAC CGCAATCCAC
TGTACTCCAT CCTATGCCTT TTACCTGGCT GAAACAGCCG AACAACTTGA CCTTCTAGAC
AAACTCTCCT TAAAAGCCGC TATCTTCGGA GGAGAGCCCT GGTCGGAAAA CACGCGGAAG
CAGCTTGAAA AGCGGCTCAA CCTTAAAGCC TACGACTGCT ATGGCCTGTC AGAGATGTTT
GGGCCAGGAA TCGGTTTCGA GTGCCAGGAG CAGGACGGCC TGCATATCTG GAGCGACAAC
TTCCTTGTAG AAGTCCTTGA TGAAAACGGA GAACAGGTCT CAGAAGGCGA AAAAGGTGAA
CTTGTCATCA GTTCCATCAA CAAGGAAGGC TTCTGCAATA TCCGATACCG CACAGGCGAC
ATGACAAAGC TTCTTGAATC TGAATGCGAG TGCGGCCGGA CAACCACAAG AATTTCCCGT
CTCATGGGCA GAGCTGACGA CATGCTGATT GTAAGAGGCA TCAATGTTTT CCCTTCCCAG
ATCCAGGACG TTATCTCCCG CATCCCACAG GTAGGCGAAC ACTTCCAGCT TATCCTTGAC
CGCAACAATC ATATGCTCGA CGAACTCACA ATAGAAGTCG AACTTGAAGA TAATGCCTTT
ACCGGCGACC TCAAAGACCT TAAAGCCGTC CAGAACTATG TCCAACACGA GCTCAAAGCC
GTCCTGAATA TCCGCACAAA TGTCGAGCTC CTTGAGAAAG GCAGCATCGA AAGGACTGCA
GGAAAGGCAA AGAGAATCAT CGACAGGCGC CCCGAGCTCT AA
 
Protein sequence
MKYWQPKYET MSPEELKKLQ LKRLQHSVKL VYDNVPFYRQ NYKAAGVTPE DIKTLEDVRK 
LPFTRKTDLR DNYPFGLFAA KKEDIVRIHA SSGTSGKPTV VGYTAKDIET WSDLIARDLT
MIGLSKGDTI QNSMNYGLFT GGIGFHYGVE RMGAMVVPAA TGNTARQLEM MIDFGVTAIH
CTPSYAFYLA ETAEQLDLLD KLSLKAAIFG GEPWSENTRK QLEKRLNLKA YDCYGLSEMF
GPGIGFECQE QDGLHIWSDN FLVEVLDENG EQVSEGEKGE LVISSINKEG FCNIRYRTGD
MTKLLESECE CGRTTTRISR LMGRADDMLI VRGINVFPSQ IQDVISRIPQ VGEHFQLILD
RNNHMLDELT IEVELEDNAF TGDLKDLKAV QNYVQHELKA VLNIRTNVEL LEKGSIERTA
GKAKRIIDRR PEL