| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2862 |
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| Symbol | |
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| ID | 3627243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3663892 |
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| End bp | 3667581 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637701712 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_306342 |
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| Protein GI | 73670327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.411367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0157624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACCTG AATTCCAGGC TTACGTGGGC CCTCGACCTT TTGAGCAGGA AGATAAATTC
ATCTTTTTTG GAAGGGACCG TGAAGCTCGA GATCTTCTGT CTCTGGTTAT TGCACATAAT
CTGGTTCTCG TCTATGCCCA GTCGGGTGCA GGCAAGACTT CACTTCTCAA TGCAGGGCTT
ATTCCTCTTC TTGAGGAAAA CCAATTTGAA GTTTTCCCTA TTGTGCGAGT TAAAGGCACA
ATTTTGGAAA ATATAACAAC TGACGAGATT TCTAATATCT ATGTCTTTAA TACGCTCGCA
AGCTGGGATG AAGGTGATTA TGATGTAGAA AGCCTGGCTA AAATGAAACT TGTTGATTTC
TTGAATGAAC AGGAGCATAT GCTGGACGAA GATGGTATGC CTTTACCCCG TGCAGTTATC
TTCGATCAGT TTGAGGAAAT ATTCTCTTTA TATCAAGACC GCTGGAAAGA TAGAGAAGGC
TTTTTTGAAC AAGTGAGCGC TGCTCTGGAA GCAGATCCTC TTTTAAGGGT GATTTTTGTC
ATGCGGGAGG ATTTTATAGC CCAGCTAGAT CCTTATGTAT ATCTTCTTCC CGAAAGATTG
CGGACGCGTT TTCACATGGA ACGTCTTCGC AGTGAGGCTG CACTGCTAGC AATCAAAGAG
CCTTTGAGAT ATACTGGCCG CTCTTTTGCG GAAGGCGTGG CAGAAAAACT TGTTGAAGAT
TTGCTAAAGA TTCGAGTTGA AACGGCGCCA GGTGAGACCG CTGAGGTAAC AGGAGAGTTC
ATAGAAGCTG TGCAGCTTCA GGTAGTATGC CAGAATCTCT GGCGAGAATT ACCTCCAGAT
ATAACACAAA TCACATTTCA GCACCTGAAA ACCTATGGCA ATGTAGAACA GGAACTTTAC
AGATTTTACG AAGAGGCTAT AGAGGTAGCT ACAGAGAAGA CACGCGTTGA TGAGGAAGGC
CTGCGTAGGT TGTGCGGTGA AGTGCTGATA ACGACGATGG GGACTCGGGG GATGGTGTAC
AGAGCTCCAG AGTATACTTA TGGTGTTCCC AACACAGCCA TCGATGTGCT TGAAAGTATG
CACCTTATTA GAGCAGAGTG GCGGGCAGGT GCACGCTGGT ACGAACTGAC TCACGATAGA
TTTATCGAAC CGATACTATC TTCTAACAAG GTTTTTAATG ATAAACTGGC AGAGAAAAAA
CGAGTAGAGA AAGAGCGCGC AGAGAAAGAA CGCGCAGAGA AAGAATGGGC TGAGAAAGAG
CAGCTAGAGA AAGAGCGGCT AGAGAAAGAA TGGGCAGAGA GAAAACGGGC TGAAAAAGAA
AGGAGCAGAA ACCGCGTTAT TAAAGGACTT GCAGCCATTT CTATTATTAT TTTGATTCTA
GCTTTATCTA CGACATATCT ATGGATACAG ACTGAACAAA ATAAGAAAGG AGCTCTTGCT
TCGTATTTAA ATGCAAAATC TCAAAATCTA CAGGAATATC CTACAACTCT GGACGAAAGT
ATTCTTCTTG CTATCGAATC ATTTCGAATC AGTGAGACAT TGCATGATGA GAGGTTACGT
CAGGAATTAT CGTTGGATGC TGATAAGTTA ATACGTCAGG AATTATTATC CATACCTCAT
AGAGTTGTGG TTCTGAACCA TAATGGTTGG GTGAATAATG TTGTATTCAG TCCTGATGGA
AAATACGCAG CCACGGCGAG TAATGATAAT ACAGCACGTT TATGGGATGC AGATACAGGT
AAACAAATTT TTGTTCTAAA CCATAGTGGT TGGGTGAATA ATGTTGTATT CAGTCCTGAT
GGAAAATACG CAGCCACGGC GAGTAATGAT AATACAGCAC GTTTATGGGA TGCAGATACA
GGTAAACAAA TTTTTGTTCT AAACCATGGC GATTGGGTGA ATAATGTTGT ATTCAGTCCT
GATGGAAAAT ACGTAGCTAC GGCGAGTAAT GATAATACAG CACGTTTATG GGATGCAGAT
ACAGGTAAAC AAATTTTTGT TCTGAACCAT AATGGTTCGG TAAATAATGC CGTGTTCAGT
CCTGATGGAA AATACATAGC TACGGCGAGT AATGACAATA CAGCACGTTT ATGGAATGCA
GATACAGGTA AACAAATTTT TGTTCTGAAC CATAATGGTT CGGTAAATAA TGCCGTGTTC
AGTCCTGATG GAAAATACAT AGCTACGGCG AGTAATGACA ATACAGCAGG TTTATGGGAT
GCAGATACAG GTAAACAAAT TTTTGTACTG AATCATGGTA GTTGGGTAAA TAATGTTGTA
TTCAGTCCTG ATGGAAAATA TATTGCTACG GCAAGTTTTG ACAATACAGC ACGTTTATGG
GATATAGCTA CAGGTAACTC AATCTTTGCT CTGAACCATG ATAGTTGGGT GTATGATGTT
ATGTTCAGTC CTGATGGAAA ATATGTAGCT ACAGCAAGTG GTGATAATAC AGCACGTTTA
TGGGATACAG ACACAGGCAA CCCAATTTTG ATTATGAATC ATAATGGTTC GGTAAATAAT
GTTGTGTTCA GTCGTGATGG AAAATACATC GCCACGGCAA GTGATGACAA AACAGCAGGT
TTATGGGATA TAGCTGCTAC AGAAGTTCTG AACCATAATG GTCCGGTATA TGGTGTTGTG
TTTAGTCGTG ACGAAAAATA CGTTGCTACA GCGAGTGGTG ACAATACAGC ACGTTTATGG
GATACAGATA CAGGTAAACA AATTTTTGTT CTGAACCATA ATGGTCCAGT ATATAATGTT
GTGTTCAGTC CCGGTGGAAA ATACGTAGCT ACAGCGAGTA AAGACAATAC AGCACGTTTA
TGGAATGCAG ATACAGGTAA ACAAATTTTT GTTCTAAACC ATAATGGTCG GGTATACAAT
GCTGTGTTCA GTCCTGATGG AAAATATATT GCTACGGCGA GCGGTGACGA TACAGCACGT
TTATGGGATA CAGATACAGG TAAACAAATT TTTGTTCTGA ACCATAGTGG TTGGGTGTAT
GATGTTGTAT TCAGTCCTGA TGGAAAATAT ATTGCTACGG CAAGTTTTGA CAATACAGCA
CGTTTATGGA ATGCAGCTAC GGGTGAACAA ATTTTTGTTC TGAGACATTC TGATAAGGTT
CTTAGTGCTG TGTTCAGTCC TGATGGAAAA TACGTAGCTA CGGCGAGTAA TGACAATACA
GCACGTTTAT GGGATGCAGA TACAGGTAAA CAAATTTTTG TACTGAACCA TGGTAGTTGG
GTGAATAATG TTGTATTCAG TCCTGATGGA AAATACATAG CTACGGCGAG TAATGACAAT
ACAGCACGTT TATGGGATGC AGATACAGGT AAACAAATTT TTGTTCTGAA CCATAGTGGT
TGGGTGAATA ATGTCGTGTT CAGTCGTGAT GGAAAATACA TAGCTACGGC GAGTTATGAT
AAAACAGCAC GTTTATGGAA TGCAGATACA GGTAAACAAG TTTTTGTTCT GAACCATAAT
GGTCCAGTAT ATAAAGTTGT ATTCAGCTCT GATGGAAAAT ACGTAGCTAC AGCGAGTGAT
GACAATAAGG CAAGATTGTG GATACATAAC AAAACAGAAG ATCTTATACA CGAAGCAGGC
AATCGTTTAA CCAGAAACCT TAACAAAGAG GAATGGAAAA ATTATATGTT TGATGAGCCT
TATGACAAGA CATTTCCAAA TTTACCTTAA
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| Protein sequence | MGPEFQAYVG PRPFEQEDKF IFFGRDREAR DLLSLVIAHN LVLVYAQSGA GKTSLLNAGL
IPLLEENQFE VFPIVRVKGT ILENITTDEI SNIYVFNTLA SWDEGDYDVE SLAKMKLVDF
LNEQEHMLDE DGMPLPRAVI FDQFEEIFSL YQDRWKDREG FFEQVSAALE ADPLLRVIFV
MREDFIAQLD PYVYLLPERL RTRFHMERLR SEAALLAIKE PLRYTGRSFA EGVAEKLVED
LLKIRVETAP GETAEVTGEF IEAVQLQVVC QNLWRELPPD ITQITFQHLK TYGNVEQELY
RFYEEAIEVA TEKTRVDEEG LRRLCGEVLI TTMGTRGMVY RAPEYTYGVP NTAIDVLESM
HLIRAEWRAG ARWYELTHDR FIEPILSSNK VFNDKLAEKK RVEKERAEKE RAEKEWAEKE
QLEKERLEKE WAERKRAEKE RSRNRVIKGL AAISIIILIL ALSTTYLWIQ TEQNKKGALA
SYLNAKSQNL QEYPTTLDES ILLAIESFRI SETLHDERLR QELSLDADKL IRQELLSIPH
RVVVLNHNGW VNNVVFSPDG KYAATASNDN TARLWDADTG KQIFVLNHSG WVNNVVFSPD
GKYAATASND NTARLWDADT GKQIFVLNHG DWVNNVVFSP DGKYVATASN DNTARLWDAD
TGKQIFVLNH NGSVNNAVFS PDGKYIATAS NDNTARLWNA DTGKQIFVLN HNGSVNNAVF
SPDGKYIATA SNDNTAGLWD ADTGKQIFVL NHGSWVNNVV FSPDGKYIAT ASFDNTARLW
DIATGNSIFA LNHDSWVYDV MFSPDGKYVA TASGDNTARL WDTDTGNPIL IMNHNGSVNN
VVFSRDGKYI ATASDDKTAG LWDIAATEVL NHNGPVYGVV FSRDEKYVAT ASGDNTARLW
DTDTGKQIFV LNHNGPVYNV VFSPGGKYVA TASKDNTARL WNADTGKQIF VLNHNGRVYN
AVFSPDGKYI ATASGDDTAR LWDTDTGKQI FVLNHSGWVY DVVFSPDGKY IATASFDNTA
RLWNAATGEQ IFVLRHSDKV LSAVFSPDGK YVATASNDNT ARLWDADTGK QIFVLNHGSW
VNNVVFSPDG KYIATASNDN TARLWDADTG KQIFVLNHSG WVNNVVFSRD GKYIATASYD
KTARLWNADT GKQVFVLNHN GPVYKVVFSS DGKYVATASD DNKARLWIHN KTEDLIHEAG
NRLTRNLNKE EWKNYMFDEP YDKTFPNLP
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