Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2845 |
Symbol | |
ID | 3627013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3638226 |
End bp | 3641108 |
Gene Length | 2883 bp |
Protein Length | 960 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637701695 |
Product | cell surface protein |
Protein accession | YP_306325 |
Protein GI | 73670310 |
COG category | [R] General function prediction only [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.726454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0327621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGGTAA ATAAATTAAC CGTTTTTTTA GTGATTACTA TCTTTTTTAT TATTGTGACA TATAACCCTG CATCCGCCAG GGAGATTACA GTAGATAGCA ATGTTTCAGA TGCAGATTTC CGCTCTATTC AAGAAGCAGT AAACAATTCT TCTCCTGGTG ATGTGGTTTT AGTTTCCCCA GGAATTTATA GAGAAAGTGT GGATATAGAA ATACAGAATA TAAGCATCCT TTCGGAGTCT GGAAATCCCA AAGACACTTT TGTTAGGGCT TTTAACGTAA GCACGAATAA TATTACTGTA AGCGGATTTA GTATAGAAGA AATCTTAAAC TTACGAGGAC ACAGCGACTA TTATTACTAT TACAACTATC CAGCTGAAAA CTGTACTATT AAAAATAATA TTTTGAAATC GGGTATTTAT AGTAACGAAT GTTTCAATTC AACTATTGAG AAAAATATAT TTTTAAAATC AGGTATCAGT GTATATGGTC CTGATAAAGG TTCTTTTACA ATTTCTGACA ATTTAATTGT TAATGGGGAC ATTGATTCTC ATCTGGGACC AAATATTGAT TTGCTTAACA ATACCATTCT AAAGGGTAGT ATAAGATTGG GTGAAGGTGG GAACAACAGA ATTATTGGAA ATTATATTTC AAATAGCTCA TATTTTGGAA TTAGCTTCTG GGAATCTTAT TCCAATGAGA TCGAAAATAA TACGGTTGTG AATTGTAGTA ACGGCATCTC CATAGAGTTT CTCTCATCGC AGAATATAAT CAACAATAAC ACCCTGATTT GTAATGATAA AGGAATTTTA GTTGGAGGAC ATGTATCAGG GGAAAACATA ATTTCAAATA ATACAGTCTC AAGCAGCAAT ATAGGAATAC TGTTGAGCGG TTCGAGCTCA GTTGGAAATC CGGCAGGAGG CAATTCACTA TTAGGCAACA CTATCTCAAA CAACAATATC GGGATATTGT TCGAAGGTTA TTCTTCTAGT AATCTGGTGA GAAATAACAG GGTGGAACTA AACAAGCAAT GCGGAGTATA TATCAACAAC GTCGGATGTG GAGCGCGATA TGGTTCTACT AACCAGTTCT ACAACAACAT CTTCAATAAT ACAATCAACT TCTTTAACGA CACGAGTAAT TATACACATG ATTATACGAG TATCTATACA GGCAATTCCT ATACTATACA ACCAATAGGC AATGGAACCG GCATAGTTCC TGTTGCCTTG AATACCATAA AAACCTCAGG CACTAATATT GTAGGTGGAC CTTATATTGG TGGTAATTAC TGGGCAAAGC CTGATGGAAC CGGTTTTTCG CAAATCTGCG CTGATTCGGA TGGAAATGGA ATTGGCGACC TGCCTTACAA TATAACCGAG AATGAGACTG ATTATTTCCC TCTTGTATCT TCATCAAGAT CAAAAGAAAC AATAATTCCC GTTGCAAATT TCAGTACTAA CATCACGCAT ACTCTTGTCC CACTTTCTGT CCAGTTTATA GATCTTTCAC GAAATGCAGT TGCATGGAGT TGGGACTTTG ACAATAATGG AATGCCGGAT TCTACAAGCC AGAATCCGGT TCATGTGTAT ACATCACCGG GAACTTACAT TATCAACTTA ACAGCAAGCA ATGGAAAAGA GACATCCTCA AAAACTCACG AAATAATTGT GCAAGAAGCT AAAGTTCCTC CTGAAGCAGA ATTCTATGCA AATGTTACAG GCGGACAGGT TCCTCTTTCA GTCCAGTTTA CAGACCTTTC AAAAAATACA ACAGCAGTAG TATGGGATTT CAACAGTGAT GGAATTCCTG ACTCTACAGA AAGAAATCCA GTTTATGTAT ATACCTATCC TGGAAACTAT ACCATTAATC TGACAGTAAA CAATATAAAA GGCATGGATT CAAAATCATC TACAGTAACA GTATCTCCTT CACAACGTCT GGAAGGTAAA CTCATCCTAA CGGAATATCA GATTACTACC AGTGAATTGG ATGAGACACA ACCTGCAATC TACGAAGACA GAATTGTATG GCAGAGTAAT TGTAATGGAA GTTATACTTT ACATCTATAC AATATATCCA CTTTTTCGGA AACTCCAATT GTTAGCAGAA ATAATTCTGA ATTTTACCCC GCTATCTATA ATGACAGGAT TGTGTGGCTG GAATCCGGGA ACATATACCT GTACAATCTC TCAACTTCTA CTAAAACTCT GATCTCAAAT CAATTGGGAA TATATCCTGC TATTTATGGT GATAAGATTG CCTGGCAGGG TGAATGTAAT GGAGATTGTA TATATATGTA TGATGTATCC AGCTCAAAGC AAGCTCGGAT AACAAACAAT AAATCATCAT CTTATCTGCC TGCTGTCTAT GGGAACAGAA TCGTGTGGGA GAGTCGTCGC ATTGCCAATG GATCTTCTAA TATCTTTACG TATGATCTCT CTACTGAAAA GGAAACTCAG ATAAGTACAG ACGAATCCTA TCAGCAATCT CCTGCCATCT ACGGGAACAG GATTGTCTGG GGAGATTACC GCAATGGAAA CAAGGATATC TATATGTACA ATTTATCTAC TTCCGAGAAA ATCCAGATAA GCACCAGTGG ATTAGCATTC GATCCTTCTA TCTATGGAAA CAGAATAGTA TGGCGGGATA GCCGCAACGG TAAGGAATAC ATAGAGAACT CAAATATCTA CATGTACGAC CTTTCCACTA AAAAGGAAAC TCAAATTACC ACTAGTGGAC CAGCAAGCTC TCCAGCTATT TATGGGAACA AGATCGTATG GGAAGATAGA CGCAATGGAG ATGCCGATAT CTATATGTGC ATTATCTCGG AACAGAGGGA AGAATCACCT GATGCAGATT TTTCTGCATC CTCTATTTCT TGA
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Protein sequence | MWVNKLTVFL VITIFFIIVT YNPASAREIT VDSNVSDADF RSIQEAVNNS SPGDVVLVSP GIYRESVDIE IQNISILSES GNPKDTFVRA FNVSTNNITV SGFSIEEILN LRGHSDYYYY YNYPAENCTI KNNILKSGIY SNECFNSTIE KNIFLKSGIS VYGPDKGSFT ISDNLIVNGD IDSHLGPNID LLNNTILKGS IRLGEGGNNR IIGNYISNSS YFGISFWESY SNEIENNTVV NCSNGISIEF LSSQNIINNN TLICNDKGIL VGGHVSGENI ISNNTVSSSN IGILLSGSSS VGNPAGGNSL LGNTISNNNI GILFEGYSSS NLVRNNRVEL NKQCGVYINN VGCGARYGST NQFYNNIFNN TINFFNDTSN YTHDYTSIYT GNSYTIQPIG NGTGIVPVAL NTIKTSGTNI VGGPYIGGNY WAKPDGTGFS QICADSDGNG IGDLPYNITE NETDYFPLVS SSRSKETIIP VANFSTNITH TLVPLSVQFI DLSRNAVAWS WDFDNNGMPD STSQNPVHVY TSPGTYIINL TASNGKETSS KTHEIIVQEA KVPPEAEFYA NVTGGQVPLS VQFTDLSKNT TAVVWDFNSD GIPDSTERNP VYVYTYPGNY TINLTVNNIK GMDSKSSTVT VSPSQRLEGK LILTEYQITT SELDETQPAI YEDRIVWQSN CNGSYTLHLY NISTFSETPI VSRNNSEFYP AIYNDRIVWL ESGNIYLYNL STSTKTLISN QLGIYPAIYG DKIAWQGECN GDCIYMYDVS SSKQARITNN KSSSYLPAVY GNRIVWESRR IANGSSNIFT YDLSTEKETQ ISTDESYQQS PAIYGNRIVW GDYRNGNKDI YMYNLSTSEK IQISTSGLAF DPSIYGNRIV WRDSRNGKEY IENSNIYMYD LSTKKETQIT TSGPASSPAI YGNKIVWEDR RNGDADIYMC IISEQREESP DADFSASSIS
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