| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2744 |
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| Symbol | |
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| ID | 3624988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3487929 |
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| End bp | 3489335 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637701597 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_306227 |
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| Protein GI | 73670212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0749502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000505067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTCGA AGAAAGTAAA TCTGGAAACT TTAGATGAGT CTAAAAAGTA TCGTGTTGGC
GCATACAGTG CCAGATATAT CCCACAGGTC AAAGAAAAAG GAATTCCCAA GTACGAATTT
CCTGAAGAGG GAATGAGTCC GAGAGCTGCT TATCAACTGG TACATGATGA ACAGAGCCTC
GACGGCAATC CCTTCCTGAA CCTGGCAAGT TTTGTCAACA CATGGATGGA ACCGGAAGCA
GACAAGCTTG TCATGGAAAA CATAAATAAA AATATCATAG ATATTTTTGA ATATCCTCAA
ACTGACAAAG TTATCCAGAG TAATATTGTG AATATGCTTG GGCGCCTTTT TAATGGGCAT
CATACCAAAT TTATGGGTAC GGCAACGGCT GGCTCTTCAG AAGCTATAAT GTTGGGTTTG
CTGGCTCACA AATGGAGCTG GAAAAACTCA GGGCGAGGCA CAGGCAAACC AAACATAATT
TTTGGAAACG ACGCTCATGT TTGCTGGGAT AAGTTTGCCA AATACTTTGA CGTCGAAGCT
AGAAAAATTC CTATAGACAA AGATGAACGT AAAATTTCGG CAGCCGCTGT CTCAGAGCAG
ATTGATGAGA ACACAATCTG TGTTGGTTGC GTTCTGGGAA CAACTTTTAC AGGAGAAATC
GATCCTGTAA AGGATATTAA TGATTTGCTT TTGAGATACA AAAAAGAAAA AGGTTGGGAC
ATACCCATCC ACATAGATGC TGCAAGTGGC GGCTTCATAT TGCCATTTAC CGAACCTGAT
TTTGAGTGGG ACTTCAGATT GGAAAGTGTA AAATCGATAA ACGTTTCGGG GCATAAATAC
GGATTGACTT ATCCTGGCCT TGGCTGGCTG ATTTTCCGTG ATGAAAATGA CCTTCCCGAA
GACCTGATTT TCCATGTAAA TTACCTTGGA GAAATGGAAG ATTCGTACAC CCTGAACTTT
TCAGGAGGCA GTGCGATGGT TGTGGCCCAA TATTATAATA TTTTAAGATT CGGAAGAGCT
GGCTATACTA GAATAATGAA AAATATCCTT GAAGTTTCCC AGGATCTCGC CGAGAAGGTT
GACAGACTGG GCCGTTTCGA AATGCTGAAC AAAGGAGAAA GACTTCCCAT CATTGCTTTC
AAACAAAAAG AGGAAACTGA TTATTCCCTG CAGCAACTCT CTTATAAGCT GAGGGAGAGG
GGCTGGATAA TTCCCGCCTA CTGTCTTCCA GAAAATGCCG CAGATATCGA GATAATGCGT
ATTGTCGTAA GAGAAAACTT CACTTCTGAC ATGGCAGCAA TTCTTGTTAA CGATATTGAA
AATGCATGTC AGTTTTTTGA AAATGGTAGA AAATCCGAAA CAAAAAAACC CTGCCCACCT
GATGATGGTA TGGTTCATAT TTGCTGA
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| Protein sequence | MISKKVNLET LDESKKYRVG AYSARYIPQV KEKGIPKYEF PEEGMSPRAA YQLVHDEQSL
DGNPFLNLAS FVNTWMEPEA DKLVMENINK NIIDIFEYPQ TDKVIQSNIV NMLGRLFNGH
HTKFMGTATA GSSEAIMLGL LAHKWSWKNS GRGTGKPNII FGNDAHVCWD KFAKYFDVEA
RKIPIDKDER KISAAAVSEQ IDENTICVGC VLGTTFTGEI DPVKDINDLL LRYKKEKGWD
IPIHIDAASG GFILPFTEPD FEWDFRLESV KSINVSGHKY GLTYPGLGWL IFRDENDLPE
DLIFHVNYLG EMEDSYTLNF SGGSAMVVAQ YYNILRFGRA GYTRIMKNIL EVSQDLAEKV
DRLGRFEMLN KGERLPIIAF KQKEETDYSL QQLSYKLRER GWIIPAYCLP ENAADIEIMR
IVVRENFTSD MAAILVNDIE NACQFFENGR KSETKKPCPP DDGMVHIC
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