Gene Mbar_A2735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2735 
Symbol 
ID3624499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3474129 
End bp3475412 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content36% 
IMG OID637701588 
Productputative iron complex transport system substrate-binding protein 
Protein accessionYP_306218 
Protein GI73670203 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0180927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000609348 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATACAA CTGTAAAAAG AAAGTTATTT GTAGGTATCT TATTGTGCTT CTTAATGTCT 
TTGAGAATAT GTGTGGCTAG TGCAGCAATT CCAGGGGATC TGAATAATGA TAACATGATC
TCTAGAGCAG AACTTTCAGA TGCAATTATC TCATACATGA AGTTTACATA TACCGGAGAA
AATGTGAAGT GTCTTGAAAA GGATATGTTG CGAGAAACCG CAAGAAAGCA TTTTACAATA
ACTGTGACTG ATCTTGCTGG AAGAGAAGTT ACTGTTCCTA CAAGAGTCGA AAGAGTTGTT
TTAGGTCAGT CTCTTTATAT TCAGGAATTT GCCGCTCTAG AAGGTGAAAA TTTTACAGAA
AAAATAGTTG GTTGGGGTTC AGAACTTGAA ACTTATGACA TAGATACCTA CAATGAATAT
CTAAATAAGT ACCCTGAAAT AGAAAACATT CCTGCAGTCG GATCTCTTAA TAAAAATACA
TTTGATACAG AAGCTATTAT TTCTCTTAAT CCTGACCTTG TTATAATGCC ATTAATGATG
AAAGAGATCG CACAAAAGAG TACTGAAAAT CTGGAAAATG CCGGAATTCC CGTTCTTTTT
GTAGATTTCT GGAAAGACCC TTTAGAAAAT ACACAGAAGA GCATACTAGT AATGGGTCAA
GTACTGGGTA GGGAAAAAAG AGCAGAAGAT ATTTCTAGAT TTTACGGGGA ACAGATGGAT
AAGGTTTATT CAGTCCTGAA TAGCGAGGAA GAAAATGATA CAAAACAGAA AGTTTACGTT
GAATATGGTT CATTTGGCCC ATCTCAGTAT GGAATGACTT TTAGTACCTC AAACTGGGGA
CCAATGATCA CAAAATTAAA TGGTATAAAC GTTGCCGAAG GTGTTGCAAG TATGGCTCCC
ATAGATCCGG AATACCTTCT GGCTGAAAAT CCTGATATCA TAATAATAGC TGGCCAGTAC
TGGCCAGAGA GTAAAGATTC AATGATACTT GGATATGCAA CAAATCTAAA TGAATCCAGA
AAACGTCTTC AAGGTTTCTG TACCCGCTCA GGATGGAACA CACTTAATGC AGTAAAAAAT
AATAATATTC ATGGGATTCA TCAAGGTATT AGTTATCATA TATATAATTT TGCGGGAATT
CAGGCACTTG CTAAATGGAT GTATCCAGAG AAATTTGCTG ATTTAGATCC GGAAGCAAAT
TTAAGAGAAT TTCATGAGAG ATATCTGCCT ATTGATTATA ATGGTGTGTG GATCTTGGAT
ATTGGGGAGG CGCAAGAGAA ATGA
 
Protein sequence
MNTTVKRKLF VGILLCFLMS LRICVASAAI PGDLNNDNMI SRAELSDAII SYMKFTYTGE 
NVKCLEKDML RETARKHFTI TVTDLAGREV TVPTRVERVV LGQSLYIQEF AALEGENFTE
KIVGWGSELE TYDIDTYNEY LNKYPEIENI PAVGSLNKNT FDTEAIISLN PDLVIMPLMM
KEIAQKSTEN LENAGIPVLF VDFWKDPLEN TQKSILVMGQ VLGREKRAED ISRFYGEQMD
KVYSVLNSEE ENDTKQKVYV EYGSFGPSQY GMTFSTSNWG PMITKLNGIN VAEGVASMAP
IDPEYLLAEN PDIIIIAGQY WPESKDSMIL GYATNLNESR KRLQGFCTRS GWNTLNAVKN
NNIHGIHQGI SYHIYNFAGI QALAKWMYPE KFADLDPEAN LREFHERYLP IDYNGVWILD
IGEAQEK