Gene Mbar_A2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2733 
Symbol 
ID3624497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3472319 
End bp3473092 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content35% 
IMG OID637701586 
ProductFe(III) dicitrate ABC transporter, ATP-binding protein 
Protein accessionYP_306216 
Protein GI73670201 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000467134 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000159988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAATTAG AGATTAATAA TTTTTCATTC AGTTACAATT CATCTCTTAT TTTCAATGAA 
ATGAATTTCA AGATAGAATC AAAGATTACA GCACTGATAG GTCCAAATGC TGCAGGTAAG
TCAACTCTCT TGAGATGTAT AGCTGGAGTA TTGGACCCTA AAGGAACGAT AATGTTTGAT
GGAAAAGATG TGAAGAGTTT TGAAAAAAAA GACCTGATAC GTTTAAGAAG CTACCTTCCT
CAAGAGTCAA AAATAACCGG TTCTTTAACC GTGTTTGAAA TTCTTCTTCT GGGAATGGCA
AATTCTTTAT TCTGGAAGGT AAACGAGGCG GATCTTGAAG CAGTTTCGAA TGTACTGAAG
TACCTAGGAA TTGAAGATTT AGCTCTAAGA AGTATTAGTG AATTAAGTGG TGGACAAAAG
CAAATGGTTT TCATTGCTCA ATCCTTAATT AGAGACCCCA AACTCCTTTT AATGGATGAG
CCAACTAATG GTTTAGACCT GAAATATCAA TTAGAGCTTT TTGAATTAAT ACAAAAAATA
ACACTAGAAA AGGGTATGAC TACTATAATT GCCTTGCACG ATCTTAATCT AGCAGCCAGA
TTTGCCGACA ATATAGTCGT TATGAGCAAG GGAGAAATTT ATGCATCAGG TTCTCCATCT
TCGGTCTTAA CGCAAAAAAC TATAGAATCT GTCTATGGGA TAAATGCTCG GATTAGTATT
GACGACGACG GGGTTCCGTG GATAAAGCCA ATTAATTCAA TTAAGAATAA GTGA
 
Protein sequence
MKLEINNFSF SYNSSLIFNE MNFKIESKIT ALIGPNAAGK STLLRCIAGV LDPKGTIMFD 
GKDVKSFEKK DLIRLRSYLP QESKITGSLT VFEILLLGMA NSLFWKVNEA DLEAVSNVLK
YLGIEDLALR SISELSGGQK QMVFIAQSLI RDPKLLLMDE PTNGLDLKYQ LELFELIQKI
TLEKGMTTII ALHDLNLAAR FADNIVVMSK GEIYASGSPS SVLTQKTIES VYGINARISI
DDDGVPWIKP INSIKNK