| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2704 |
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| Symbol | |
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| ID | 3624452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3430955 |
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| End bp | 3432700 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637701558 |
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| Product | hypothetical protein |
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| Protein accession | YP_306188 |
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| Protein GI | 73670173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00140481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0421451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAG AGTTGCAACT TATTAATTTT AGATGTTATC GAAAACACAG TATTCCTTTC
AAACAAAATA CAATAATCGT TGGGGAAAAT AATGCTGGGA AATCGACTAT AATTGAAGCT
CTTAGAATCG TTTCAATAAT AGCATCGAAA TACAAGTATC TAACATACAA TAAACCTCCA
GATTGGCTAG ATACTCCTAT TGGACACAAA GGAGTCATAC CTTCTCTAAA AGAATATGAT
TTTCATTTTG AGAGTATAAC TTACCGTTAT AGTGGGCTGC CAGCTCAAAT TAAAGCCCTT
TTTACAACGG GAGAATTAAT TGAAGTATAT ATTGTCAGAG AAGGAAAAGC ATTCGCTGTT
GTAAAAGATA AAAATAATAA TACGATTGAA ACAAAGAGTG ACGCATTACT CACAAATCTT
CCAGCAGTCT TGGTTTTGCC AGAAATTTCC CCCTTACTTT CAGAAGAAAA AAGGCTTATT
AAAGACTATG TTAAACAAAA CCTATTCTCA CGACTATCTT CCCGTCATTT TAGAAACCAA
ATATTAATTT ATCCAGAAAA ACACAAAAAA TTTAAAGAGC TTGTGGAAAC TAGTTGGGAA
GGGTGTCAAA TAAGGAACAT CGATAATAAT GGTAAATTCA ACGAAGAAGA TTTGTCCCTG
ATTGTAAGAG ATACTGATTT TTCCGCAGAA GTTGGTTGGA TGGGACATGG GCTGCAAATG
TGGCTTCAAA TCATGTGGTT TTTATCTTTT ACTGAAAAAA ACAACATTGT TATCCTAGAT
GAACCAGATA TTTACATGCA TGCTGATTTG CAGAGAAAAA TAATTAGATT GCTATTGGGA
GAACGATACA AGCAATTAAT TGTTGCAACA CATTCAATTG AAATCATTTC CGAAGTAGAG
CCAGAAAATA TATTGGTAGT TGATAAAACA AAACCGACGT CGAGATTTAC AAACACTATT
CCTGCTGTAC AGAAAATCAT AGATAATATT GGGGGAGTTC ACAATATACA ACTTACAAGG
CTTTGGAAGT GTAAAAAATG CATTTTAGTA GAAGGTAAGG ACTTGAAAAT TTTAAGACAT
TTTCATAATA CATTATTTCC AAAGTCCGAG ATTCCAATTG AAACAATACC TAACATGTCC
ATAGGAGGTT GGAGTGGGTG GAATTATGCA ATTGGATCAT CAATGTTTTT AAAAAACAAC
GCCGATGAAA CGATATACAC ATACTGTATA TTAGATAGAG ACTATTATAC CAAAGACATA
ATTGAGACAA GATTAAAAGA AGCAGAGAGT CGCGGTGTAA AACTCCATAT TTGGTCACGA
AAAGAAATTG AGAATTATTT AATAGCCCCT AAAGCTATAA GCAGAATTAT TAATTGCGAA
ACAAGTCAGG GAATATGTGC TGATGAATCA AAAATAATTG AACAAATAGA AAAGATATGT
AATGATCTTT ATTATGATAC ATTTGACTGT ATAGCCAATC AAATATCAGA TGCGAATCGA
AGAGACCACC AAAAAGCAAA TTCGAAAGCT AGAAAGATAA TGAAAGAGTA TTGGAAGTCA
ATAGATGGAA AACTAACTTT AGTTTCAGGA AAAGAAGTCT TGAAAAGATT ATCTAATTGG
AGTCAAGCAG AGTATCACGT ATCATTAAAT AGTAAAAAAA TAGCAAGAGA AATGAAAGAA
GAAGAGATAT TGCCAGAAAT GAAGAAAGTG ATCCAAACAA TAGAATATAG GCTTGATTCA
ATATAA
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| Protein sequence | MIKELQLINF RCYRKHSIPF KQNTIIVGEN NAGKSTIIEA LRIVSIIASK YKYLTYNKPP
DWLDTPIGHK GVIPSLKEYD FHFESITYRY SGLPAQIKAL FTTGELIEVY IVREGKAFAV
VKDKNNNTIE TKSDALLTNL PAVLVLPEIS PLLSEEKRLI KDYVKQNLFS RLSSRHFRNQ
ILIYPEKHKK FKELVETSWE GCQIRNIDNN GKFNEEDLSL IVRDTDFSAE VGWMGHGLQM
WLQIMWFLSF TEKNNIVILD EPDIYMHADL QRKIIRLLLG ERYKQLIVAT HSIEIISEVE
PENILVVDKT KPTSRFTNTI PAVQKIIDNI GGVHNIQLTR LWKCKKCILV EGKDLKILRH
FHNTLFPKSE IPIETIPNMS IGGWSGWNYA IGSSMFLKNN ADETIYTYCI LDRDYYTKDI
IETRLKEAES RGVKLHIWSR KEIENYLIAP KAISRIINCE TSQGICADES KIIEQIEKIC
NDLYYDTFDC IANQISDANR RDHQKANSKA RKIMKEYWKS IDGKLTLVSG KEVLKRLSNW
SQAEYHVSLN SKKIAREMKE EEILPEMKKV IQTIEYRLDS I
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