Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2688 |
Symbol | |
ID | 3624798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3406067 |
End bp | 3406552 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701542 |
Product | hypothetical protein |
Protein accession | YP_306172 |
Protein GI | 73670157 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000464227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.10076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATC AAAATGTGAT ACAGCTGTAT AATACGTTGA ACCGTCTAAG CAGGCAAATG CACCGTTTTT CTCATAGGGC AGAACACAAA CGCGGTCTAT TCTTCGGGCA GTCAAAATTG CTGCAGCTAA TCTCAAAAAA TGAAGGAATT ATCCAGCGAG ACCTTGCGGA ACAAATGGAT ATGCGCCCTT CATCTATGAC GGAGGCGCTC GGAAGGCTTG AGCAACTTAA CTTGATTTTG CGTAAACGGG ATGAAAAAGA TCAAAGGACA ATGCACATCT ACCTGACAAA TAAAGGCAGG GAAATTGTTG AAGACGCTGT TAGGTCCGAA GAAGTATTCA TAAAAAAATT TACAGACATA GTGTTCAAAG AAATCTCGGA AGAAGAACTC GAAAAGATGC TTGCAATTAC CTCAAAGCTG TGTAAAAGTC TTGATACGTT GGACTCGAAA GAATCGAAAG ATAGAGACGA AGAATGCTGT CAATAA
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Protein sequence | MQNQNVIQLY NTLNRLSRQM HRFSHRAEHK RGLFFGQSKL LQLISKNEGI IQRDLAEQMD MRPSSMTEAL GRLEQLNLIL RKRDEKDQRT MHIYLTNKGR EIVEDAVRSE EVFIKKFTDI VFKEISEEEL EKMLAITSKL CKSLDTLDSK ESKDRDEECC Q
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