Gene Mbar_A2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2688 
Symbol 
ID3624798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3406067 
End bp3406552 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content41% 
IMG OID637701542 
Producthypothetical protein 
Protein accessionYP_306172 
Protein GI73670157 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000464227 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.10076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATC AAAATGTGAT ACAGCTGTAT AATACGTTGA ACCGTCTAAG CAGGCAAATG 
CACCGTTTTT CTCATAGGGC AGAACACAAA CGCGGTCTAT TCTTCGGGCA GTCAAAATTG
CTGCAGCTAA TCTCAAAAAA TGAAGGAATT ATCCAGCGAG ACCTTGCGGA ACAAATGGAT
ATGCGCCCTT CATCTATGAC GGAGGCGCTC GGAAGGCTTG AGCAACTTAA CTTGATTTTG
CGTAAACGGG ATGAAAAAGA TCAAAGGACA ATGCACATCT ACCTGACAAA TAAAGGCAGG
GAAATTGTTG AAGACGCTGT TAGGTCCGAA GAAGTATTCA TAAAAAAATT TACAGACATA
GTGTTCAAAG AAATCTCGGA AGAAGAACTC GAAAAGATGC TTGCAATTAC CTCAAAGCTG
TGTAAAAGTC TTGATACGTT GGACTCGAAA GAATCGAAAG ATAGAGACGA AGAATGCTGT
CAATAA
 
Protein sequence
MQNQNVIQLY NTLNRLSRQM HRFSHRAEHK RGLFFGQSKL LQLISKNEGI IQRDLAEQMD 
MRPSSMTEAL GRLEQLNLIL RKRDEKDQRT MHIYLTNKGR EIVEDAVRSE EVFIKKFTDI
VFKEISEEEL EKMLAITSKL CKSLDTLDSK ESKDRDEECC Q