| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2685 |
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| Symbol | |
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| ID | 3624795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3401334 |
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| End bp | 3402782 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637701539 |
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| Product | homospermidine synthase |
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| Protein accession | YP_306169 |
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| Protein GI | 73670154 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0137056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.192597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA AGTTTTCCAA TAAAGTCCTC ATTATTGGCT ATGGATCAGT TTCACAATGC
ACCCTGCCCC TTTTACTGGA TAAACTCGAT GTTCTGTTAG AAAACATTAC TTTGATTGAT
TTTGAAGACA AATCAAAAGC CCTAAAAAAA TATACAAATC AGGGATTAAG ATTTGTCTGT
GAAAAAATTA CCCCAAAAAA TTTGGATCAA GTTTTGTCAC GATATATGGA AAATGAAGGC
TTGCTCATTG ACCTTTCATG GAACATCGAT GCCAATGAAA TCATTAAGTG GTGTCATGAT
CACAATGTAT TGTACGTTAA CACGTCTGTT GAAGTATGGG ACCCTGCTGA AAAATTTTTG
ACTCAAAGCC TATTGGAAAA ATCGCTTTAC ATAAGGCAAA TGAAATTGCT TGAACTTTCC
CGTGATTGGA AAGATGCGCC GACTGCTGTT GTTGACCATG GCGCAAATCC TGGCCTGATA
ACTCACTTTG TAAAGCAAGG CTTGCTGGAT ATTGCCGCCC GCACCTGTGC TGATAAGAAA
GTATCTCCCG AAGATGAACA GGAAATTGCC CTCCTTGCAA AAAACAAGGA CTTTGCCCAC
CTCGCTAAGA AATTGGGAGT CAAAGTGATC CACTGTAGCG AGCGAGATAC TCAAGTCGCA
AACAGGGCAA AGGAAGTTAA TGAATTTGTA GGAACATGGA GCATTGAAGG ATTAAGGGAA
GAAGGGACTG CTCCTATTGA AATAGCCTGG GGAACGCATG AGAGCAAATT GCCGCCCATG
GCGCATATAC CTCCTTACGG ACCTAAAAAT GTGGTTCTCT TGCCCCAGAT GGGCATTAAT
ACATGGGTCA GATCATGGAT ACCGGATGAA GAAATTGTAG GTATGGCGAT CCGTCATGGC
GAATCATATG GCCTTTCAAA ACTGTTAACT GTTTGGGAAG ACGATAAGCC AGTCTATCGG
CCTACCGTGC ATTATGCTTA CATGCCCTGC CATGATACGC TTTCTTCTCT CTGCGAACTG
CGAGGCCGGA ATTATAAGCT TCAACCGAGA CTTCGGATCA TGACAAATGA AATCACATCT
GGTGAGGATA TAATGGGAGC ACTCTTAATG GGCCATTCTT ATAATTCCTG GTGGACTGGA
AGTGCATTGA GCATTGAAGA GACCAGATCC CTTGCTCCCG GCCAGAACGC TACGACTCTT
CAGGTAGCAG CAGGCATTGT TGCTGCTATA CTCTGGATGC TTGAAAATCC GCGAGAAGGC
ATTAAAACAC CTGAAGACTT GCCTCATGAT TTTGTCCTGA ATATTGCCAA ACCATATCTT
GGTAAATTTA TTTCCACATC ATCGGACTGG ACGCCGCTTA AAAATCGCAA AATATTTTTC
AAAGAAAGCC CGGCAGTAAA ACACAATCCT GATCCATGGC AATTCGAAAA TTTTCAATTC
GTAAGTTAA
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| Protein sequence | MKKKFSNKVL IIGYGSVSQC TLPLLLDKLD VLLENITLID FEDKSKALKK YTNQGLRFVC
EKITPKNLDQ VLSRYMENEG LLIDLSWNID ANEIIKWCHD HNVLYVNTSV EVWDPAEKFL
TQSLLEKSLY IRQMKLLELS RDWKDAPTAV VDHGANPGLI THFVKQGLLD IAARTCADKK
VSPEDEQEIA LLAKNKDFAH LAKKLGVKVI HCSERDTQVA NRAKEVNEFV GTWSIEGLRE
EGTAPIEIAW GTHESKLPPM AHIPPYGPKN VVLLPQMGIN TWVRSWIPDE EIVGMAIRHG
ESYGLSKLLT VWEDDKPVYR PTVHYAYMPC HDTLSSLCEL RGRNYKLQPR LRIMTNEITS
GEDIMGALLM GHSYNSWWTG SALSIEETRS LAPGQNATTL QVAAGIVAAI LWMLENPREG
IKTPEDLPHD FVLNIAKPYL GKFISTSSDW TPLKNRKIFF KESPAVKHNP DPWQFENFQF
VS
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