| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2662 |
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| Symbol | |
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| ID | 3626713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3370021 |
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| End bp | 3373251 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637701518 |
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| Product | putative type I restriction enzyme R protein |
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| Protein accession | YP_306148 |
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| Protein GI | 73670133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.322424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.707209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGAAAA TGGTTGCCGA GATAAAAAAT AATGACGGAT CAGCGAGAAA CGATGTTTTA
AAAGAAGAAG ATGAATCAGG TTCTGGTGAT TATAGTGAAG GCACCCTCGT AGAAGAGTCC
GCAATCCGAG AATTCGAAAA ACTGGGTTAT ACTTTTTTAA ACTGCTTCAA TGAAAAAATC
AGGCTTGACG GAAAAGGGAC ACTGGGCAGG AAAACAAAAT CCGAAGTATT GCTTTTCAGG
AAACTGAGAG AGGCAATCAA AAAACTCAAT CCTGAGATTT GCCCCGAAGC TGAAGAGTCC
GCAATCCGGG AACTGGCAAA AGACAGGAGC AGGCTTAGCC CTGTAAAGGC AAATCAGGAA
ATTTATTCAT TAATCAAAAA CGGGGTCAAG GTCAAAGTCC GAAATGAAAA AGGGGAAATT
GAAGACCGGA CCATAAAGAT TATCGATTTT GAAAATCCCG AAAATAACGA CTTCTTTTTA
GCTTCCCAGT TCTGGATTAT GGGAGAAATG GAATCAAGGC GGACCGACCT TCTGGGATTT
GTTAACGGGA TTCCTTTAAT TTTTCTTGAG CTAAAATCGA CTGCCAGAAG GGTCAAAGAG
GCTTTTGACG ATAATCTTAC AGACTATAAA GAAACAATTC CACAGCTTTT CTGGTACAAT
GCATTTATAA TCCTCTCCAA CGGCAGAGAC TCAAAAATCG GCACTGTTAC AAGCGGTTTT
GATCATTTTG GGGAATGGAA AAGGGTTGAA GATGAAAATG AAACAGGAAG TACCCTGCTG
GATACAATGA TAAAGGGAAC CTGCGAAAAA AGCCGCTTCC TTGATATCCT GGAAAACTTC
ACGCTTTTTT CTAGCAGTGA AGGGCACTCA GTCAAAATTG TTGCCAAAAA TCACCAGTAC
CTTGGAGTTA ATAATGCCAT AGAGTCCTTC AAAAAACGCA ATGAGGATGA AGGAAAAATC
GGTGTCTTCT GGCACACTCA GGGTTCTGGA AAAAGCTATT CCATGATATT TTTTACCCAA
AAAATCCTGC GAAAATTTCC TGGCAATTAC ACCTTCGTGG TCGTAACCGA CAGGGATGAA
CTGGACGAGC AGATATATCA GAACTTCCAG AACGCAGGCG TAATAAGCGA AGTTGGCGTA
CAGGCCAGAA GTAGTAGGCA TCTCAGGCAA CTGCTAACTG AAGACCACAG GCTGGTTTTC
ACTTTGATCC ACAAATTCGG GACTAACAAA GGAGTTAAGC ATCCCCTACT TTCGGATAGA
GATGACATTA TAGTAATTGC AGACGAAGCC CACAGGACCC AGTACGACAC CCTGGCGCAA
AACATGAGAG ATGCTCTGCC GAATGCGAAT TTTATAGGTT TTACAGGCAC GCCTTTAATG
GCTGGCGAAG AAAAGACAAA AGACACATTC GGAGACTACG TAAGCATCTA CAACTTCATA
CAATCGATAG AAGATGGAGC AACCGTCCCC CTCTATTATG AAAATCGCGT GCCTGAAGTC
CAGTTGCATA ACGAGAGCCT CAATGATGAT ATTTATCGAG AAATCGAAAA AGCAGGTTTG
AATGATGAAG AAGAATCCAA ACTTGCTACC GACTTTGCAA AGGAATACCA GATAATCGTA
AGGGAAGAAC GCCTGGAAAC GATTGCAAAA GACATTGTAA CGCATTATAC CACACGTGGT
TACGCCGGAA AAGCCCTTGT AGTATCCATT GATAAGCTTA CAACGGTCAG GATGTACGAT
AAAGTCCAGA AATACTGGAA AATGCATATT AACGAACTCA AAGAAAAGAG AAAAGAAATA
ACTGAAGGTA AGAAAGCTAT AGATCTGGAA AAACAGATCT CCGAACTTGA AAACACTGAT
ATGGCAGTCG TTATCAGCGA AGGGCAGAAT GAGGTAAAGA AATTTGAGGA AAATGGGCTG
GATATAAGGC CACACAGGAA AAGAATATCT GTGGAAGATC TGGAAGAAAT TTTCAAGGAT
TCAACAAGTA AGCTCAAAAT TGTTTTCGTG TGCAGCAAAT GGAGAGAAGG GTTCGATGTC
CCCTCGCTTT CCACGATTTA TCTTGACAGG CCCATGAAGG ACCACAGCCT CATGCAAACG
ATTGCCAGGG CAAACAGGGT CTTTGGAGAT AAACCCGGAG GCTTCATTGT CGACTATGCT
GGTATTTTCA GAAATCTTGA ACAGGCCCTC AAGATTTATG CAACGCCCAG ATCTGGCGGA
GTTGAAATCC CACTCAAGCC GAAAGAAAAA CTTGTGGAAG CCCTTGAACA GAAGCTTAAA
GAAATAAATA AATTCCTTTC CGGCCTTTCG GTAAATCCTG ACAAAATCAT CAAGATGAAG
TCGAGTTTTG ATAAAATAAA TCTCTTGAAA AACGCAACTG ATGCTATTCT CATAAACGAG
TCAACAAAAA AGAAGTTTTT AACCGAAGCT GGGACTGCTC TAAAAATATA CAAATCTATA
CTTCCCCACA AACGGGCCTC AGAGTTTTTT CCACAGGTAA CTCTTTATGA AGAACTGGTA
AACGAAATTC GTTCTCTTGA TCCTGAAGTC GATATCTCAA GAGTAACGGA CGGTATACAG
CGAGTCCTCG ATACATCGAT TAAGCCCAGA GAATATATAA TCAAGGAATC AAAAAAGGGC
AGAATAATTG CTCTTAGAGA TATCGACTTT GATGCCCTGG CAGATAGATT CGATAAGCAG
CATAAGAACA CTGAGTTTGA ATGGCTAAAA AATCTTCTCT CGTACAAACT AAAAGAAATG
GTTAAAATTA ATAACAGCCG CCTTGATTAC CAGAAAAGTT TTGAAAAACT GATCGAAAAT
TATAATTCAG GCTCTGATAA CTCAGATTAT CCTTACAGAG AACTAATCGA ATTTGCTAAA
AAGCTGAAAA AAGAAGATGA GAGAGCAATA AAGGAAAATT TAACTGAAGA AGAACTCTCC
CTCTTTGACA AGCTAAAAAA ACCTGATCTA ACCGAGAAAG ATAAAAAACA GGTAAAGCAG
GTTGCAAGAG ATCTGCTTTC CACACTAAAA GCTGAGAAAC TCGTTCTGGA CTGGCGGAAA
AAACAGCAGG CAATGGCCGC AGTTAAAAAA GAAATTGAAG ACGAACTTGA TAAGGGACTG
CCCGAATCAT ACGACTCCAG AATCTATGAA GAGAAATGCA ATACAGTCTT TCAGCACATT
TATGATTCTT ATGCCGGTGA CAGCCATAGC ATTTATGAAG CAATAGCCTG A
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| Protein sequence | MLKMVAEIKN NDGSARNDVL KEEDESGSGD YSEGTLVEES AIREFEKLGY TFLNCFNEKI
RLDGKGTLGR KTKSEVLLFR KLREAIKKLN PEICPEAEES AIRELAKDRS RLSPVKANQE
IYSLIKNGVK VKVRNEKGEI EDRTIKIIDF ENPENNDFFL ASQFWIMGEM ESRRTDLLGF
VNGIPLIFLE LKSTARRVKE AFDDNLTDYK ETIPQLFWYN AFIILSNGRD SKIGTVTSGF
DHFGEWKRVE DENETGSTLL DTMIKGTCEK SRFLDILENF TLFSSSEGHS VKIVAKNHQY
LGVNNAIESF KKRNEDEGKI GVFWHTQGSG KSYSMIFFTQ KILRKFPGNY TFVVVTDRDE
LDEQIYQNFQ NAGVISEVGV QARSSRHLRQ LLTEDHRLVF TLIHKFGTNK GVKHPLLSDR
DDIIVIADEA HRTQYDTLAQ NMRDALPNAN FIGFTGTPLM AGEEKTKDTF GDYVSIYNFI
QSIEDGATVP LYYENRVPEV QLHNESLNDD IYREIEKAGL NDEEESKLAT DFAKEYQIIV
REERLETIAK DIVTHYTTRG YAGKALVVSI DKLTTVRMYD KVQKYWKMHI NELKEKRKEI
TEGKKAIDLE KQISELENTD MAVVISEGQN EVKKFEENGL DIRPHRKRIS VEDLEEIFKD
STSKLKIVFV CSKWREGFDV PSLSTIYLDR PMKDHSLMQT IARANRVFGD KPGGFIVDYA
GIFRNLEQAL KIYATPRSGG VEIPLKPKEK LVEALEQKLK EINKFLSGLS VNPDKIIKMK
SSFDKINLLK NATDAILINE STKKKFLTEA GTALKIYKSI LPHKRASEFF PQVTLYEELV
NEIRSLDPEV DISRVTDGIQ RVLDTSIKPR EYIIKESKKG RIIALRDIDF DALADRFDKQ
HKNTEFEWLK NLLSYKLKEM VKINNSRLDY QKSFEKLIEN YNSGSDNSDY PYRELIEFAK
KLKKEDERAI KENLTEEELS LFDKLKKPDL TEKDKKQVKQ VARDLLSTLK AEKLVLDWRK
KQQAMAAVKK EIEDELDKGL PESYDSRIYE EKCNTVFQHI YDSYAGDSHS IYEAIA
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