Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2605 |
Symbol | |
ID | 3626789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3299758 |
End bp | 3300915 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637701464 |
Product | LL-diaminopimelate aminotransferase |
Protein accession | YP_306095 |
Protein GI | 73670080 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.121492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.427052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTCTG ATCGAATCAA TGCACTACCC CCATACCTTT TTGCTACCAT AGACGAAGCG AAGGACGAAC TAATTGCCAG AGGAGTCGAT GTTATAGACC TTGGCGTAGG AGACCCTGAC CTGCCGACGC ACCCGCACAT TGTCGAGGCT ATGCGGGAAG CTGTCTGCGA CCCTAAAACG CACCAGTATC CTTCTTATGC CGGGATGCCG GAATTCAGGA AAGCGGCGGC GGACTGGTGT AAGAAATACA AGGGAGTTGA GCTTGACCCT GCGACTGAAG TCCTTGCCCT GATCGGGTCA AAGGAAGCGG TTGCGCATAT TCCACTCGCG TTTGTCAACC CTGGAGATGT CGTGCTCTAT ACCGATCCCG GGTATCCGGT TTACAAAATA GGAACAATGT TTGCGGGTGG AGAACCGTAT CCACTACCGC TAACTGCCGA AAATAATTTC CTGCCTGACC TGGATTCAAT TCCTGAGAAT ATTCTGAAAA AGGCAAAGTT ATTCTTCTTT AATTATCCTA ACAATCCAAC TGCTGCAACT GCGGACATGC AGTTTTTTGA AAAGGTCGTT AAGTTCTGCA AAAAATACGA CATCATTGCA GTGCATGACA ACGCCTACTG CCAGATGACA TATGACGGGT ACGAATCTCC CTCTTTCCTT GCTGCCAACG GGGCAATGGA CATTGGCATG GAACTCTATT CGCATTCTAA GACCTATAAC ATGACAGGCT GGAGGCTCGG GTTTGCGGTC GGAAATAAAG ACCTTATAAT GGGGCTCGGT AAGGTCAAAT CCAATGTGGA CTCAGGCGTC TTTGATGCTA TCCAGATCGC GGGCATTGCA GCACTCTGTT CTTCGCAGAC CTGTGTCGAA GAAACAACTA AAATATATCA GGAGAGACGG GATGCTCTGA TAGAAGGACT CAAGGCCATG GGCCTCAAAG TAAAGCTTCC AAAAGCTACC TTCTATATCT GGGCTCCGGT ACCTGAAGGT TTCACCTCAA TGAGTTTTGC AAAACTCCTG CTTGAAGAAG CTGGAATCAT TGCAACCCCT GGTGTCGGGT TTGGAGAAGC CGGCGAAGGC TACATTAGAT TTGCCCTCAC AAAATCGGTC GAGAGAATAA GAGAAGCTGT CGAAAGGATG AAAAAACTAA AATTCTAA
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Protein sequence | MYSDRINALP PYLFATIDEA KDELIARGVD VIDLGVGDPD LPTHPHIVEA MREAVCDPKT HQYPSYAGMP EFRKAAADWC KKYKGVELDP ATEVLALIGS KEAVAHIPLA FVNPGDVVLY TDPGYPVYKI GTMFAGGEPY PLPLTAENNF LPDLDSIPEN ILKKAKLFFF NYPNNPTAAT ADMQFFEKVV KFCKKYDIIA VHDNAYCQMT YDGYESPSFL AANGAMDIGM ELYSHSKTYN MTGWRLGFAV GNKDLIMGLG KVKSNVDSGV FDAIQIAGIA ALCSSQTCVE ETTKIYQERR DALIEGLKAM GLKVKLPKAT FYIWAPVPEG FTSMSFAKLL LEEAGIIATP GVGFGEAGEG YIRFALTKSV ERIREAVERM KKLKF
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