Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2583 |
Symbol | |
ID | 3625909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3262156 |
End bp | 3262782 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637701443 |
Product | hypothetical protein |
Protein accession | YP_306074 |
Protein GI | 73670059 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.258371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.140618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAGAAC AATCTCAGTT AATCTATTTT ATTGCAGCCT CTGCGGCACT TACGCTCCTT CCGGGTCCTG ATATTCTATT CGTAATTACT CAGAGCATTT CGCAGGGCAA AAAGGCAGGA ATTGCAACAG CATCCGGCCT CTCTACAGGC GTACTCGCCC ATACCACCGC AGCTGCACTT GGAGTTTCTG CCCTTGTATA TAAGTCTGCT CTTGCTTTTG AAATTGTAAA ATACGCAGGT GCAGCTTATC TGCTCTACCT TGCCTGGCAC GCCTTAAAAG AAAGTGAAGA GCTAATATCT TCGACTCCTG TCAGAGAAAC CAATACTTTT GCCCTCTACA GGCGCGGGGT CTTTATGAAC GTTTTGAACC CTAAGGTTGC TCTATTCTTC CTTGCCTTCC TGCCTCAGTT TGTAAACATA GGTTCGGGAA ATGTCCCCAT GCAGATGATA TTTCTGGGAA TAATTTTTAT GGTTCAGGCC TGGCTAATAT TTTCCGCTGT CTCGGTTTTT GCCGGAACCG TTGGCGAGAG AATTATACAG AAGCCAGGAG TTGGCAGGTA TATTAACTGG GGAAAAGCCG GAATTTTCAC ATTCATTGGG ATAAAACTTG CATTGTCTCA TAAATGA
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Protein sequence | MIEQSQLIYF IAASAALTLL PGPDILFVIT QSISQGKKAG IATASGLSTG VLAHTTAAAL GVSALVYKSA LAFEIVKYAG AAYLLYLAWH ALKESEELIS STPVRETNTF ALYRRGVFMN VLNPKVALFF LAFLPQFVNI GSGNVPMQMI FLGIIFMVQA WLIFSAVSVF AGTVGERIIQ KPGVGRYINW GKAGIFTFIG IKLALSHK
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