Gene Mbar_A2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2576 
Symbol 
ID3625902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3251244 
End bp3253652 
Gene Length2409 bp 
Protein Length802 aa 
Translation table11 
GC content46% 
IMG OID637701436 
ProductATP-dependent protease La 
Protein accessionYP_306067 
Protein GI73670052 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0456726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0149166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAT TGACAATGTA TCCAGAACAA CCCGATGAAA ACAGAGAAAG CATCGTAATG 
CCGCTTTTTG AGGTAGTGGT CTACCCGAAA AGCCGGGCCA AATTCCTTGC TGACAAAGTC
ACAGGGGAAA TACTCCTAAA TGACATGAAA AACGCCGAAT CTGTATCTGC CATCGGGCTG
ACGGTAAAGA ACGGCACAAA GGCTTCAGAC CTATCCGAAG AGAGTCTGTA TAAAATTGGA
AACTTGCTTA ATATTACATA TGTACAGCCT TCTGATGACG GATATCTTGT TGTCGCAAAG
GGTATTGAAA GGGTAGAGGC GGTTTCTCTT TACCAGAAGA ATGGGCTGTT CTACGCAACT
TACAGGCCTG TCCATGATCT GCCGGATTTC GATGAGGACG CTGAAACTGA GGTAATGGCA
AATATAAAAA AGACAATTCA CGAGATCAGT GCCCGGTTCC AGGGTTCTGA ACAGTTTACC
AAGTCAATCG ATAAGATGGA CTCCATTGAC CAGATAATGG GATTTGTCAT GCCGTACATA
CCCGTAAAAC TTGCCGAAAA GCAAAGACTC CTTGAGCTTG CCTCGGTTCG TGAGAGGTAT
CTTCTGTTCC TTCACATTCT GACAAAGCAT AAAGAAAATA TCAATCTCCA GATCGAAATG
GCAAAAAAAG TCACTGACAA AATAAGCAAG TCGAACAGAG AAGCAATGCT CCGTGAACAA
CTGAAGGTGA TTCAGGAAGA GCTCAACGAA GGGGATGACT CGGCTTCAGG CGATGCTGCA
TACAGGGAGA AAATTGAAAA CTCAACTATG CCTGATGAGG TAAAAAAGAA GGCATTTTCC
GAATTAAAGA AACTAGAAAC CGGAGGCAGT CACAATCCTG AAGCCCCTGG TATAAGGAAT
TATCTTGACC TCCTGCTCGA CCTGCCCTGG ATAACCGAAG AGAAAAAGAG CATCGATATC
GCCGAAGCCC GTCGTGTGCT TGAGAGCAAC CACAATGGGC TGGAAAAGGT CAAGGAGAGA
ATAATCCAGC ACCTGGCAGT TATGAAATTA AAACACGAGA AGCAGGGCTC AATTCTGCTC
CTGATAGGAC CGCCCGGAAC CGGTAAAACA AGCCTTGGGA AAAGCATTGC TGATGCTCTG
GGCAGAAAAT ATATCCGGAT CAGCCTTGGA GGTGTCAAAG ACGAAGCTGA AATCCGGGGA
CACAGACGGA CATACATCGG CGCCCTGCCC GGAAGGATTA TTCAGGGCAT GAGAAAAGCA
GGCACGAAAA ATCCTGTGTT TATTCTTGAT GAGGTTGATA AGCTTTCAGC TTCTTACTCT
GGAGACCCGG CAAGTGCTCT CCTGGAAGTC CTTGACCCAG AACAGAACAG CACGTTCTCA
GACCACTATC TGGAAATCCC ATATGACCTG TCCGATGTTC TATTCATAGC GACAGCAAAC
TCTATGGCAA ATATTCCCTG GCCGCTTCTT GACAGAATGG AGACCATTGA GATTTCAGGT
TACACAAAGA ATGAGAAACT TGCAATTGCA AAAGATCACC TGGTGCCTTG CATACTGGAA
GACCATGGTC TTGATGCGGA GAAACTTAAA ATTGAAGATG AGGCCCTTAA AGTAATCATC
GATAAGTATA CCCGCGAAGC CGGAGTCCGG GGACTTAAAA AGCAGCTTGC TAAGACTGCA
AGGTTTGTGT CAGAAAAGAT CGTATCAGGC AAGGCCGACC TTCCTTACGT GGTCAGGGCT
GATATGCTCA AAGAAATTCT CGGAAAAGAG ATAATCCGGC AGGAAGAGGC CAGAAAAGAA
AATGTACCCG GCGTGGTTAC AGGACTTGCA TGGACGCCTG TGGGAGGAGA TATTCTCTTC
ATAGAAGGTA CTTTTATGCC AGGCAGTGGA AAACTCACAC TTACAGGCCA GCTTGGGGAT
GTGATGAAAG AATCTGCAAA GATATCGTTG AGCCTTGTTC GGTCACGGCT TGCAAACACC
GCAAATAGCT TTGACTTTAC TTCAAGCGAT ATCCACATCC ATGTGCCTTC AGGTGCAACC
CCAAAAGACG GCCCGTCAGC AGGCGTAACC CTCTTTACCG CCCTTACATC CCTGATAATC
GGAAAAGCGG TTGATCCCAA ACTTGCCATG ACAGGGGAAA TAACGTTGAG CGGTGCAGTA
CTGCCTGTTG GAGGCATAAA AGAGAAAGTT CTGGCAGCCC ACAGGGCAGG CATAAAGAAG
ATAATTTTGC CTAAAGAAAA CGAAAGAGAC CTTGAAGATG TGCCCGAAGA TGCCAGAAAC
GAACTTCAGT TCGTGCCTGT AGAGACCATT GAAGAGGTCT TGAGAGAAGC CCTGGATATT
GATCTACCCA GGCCGGTAGT ACCATCATCA TATCCTGGAA GCAGTTATGC ACCTGCACAT
AGTGTATAA
 
Protein sequence
MRRLTMYPEQ PDENRESIVM PLFEVVVYPK SRAKFLADKV TGEILLNDMK NAESVSAIGL 
TVKNGTKASD LSEESLYKIG NLLNITYVQP SDDGYLVVAK GIERVEAVSL YQKNGLFYAT
YRPVHDLPDF DEDAETEVMA NIKKTIHEIS ARFQGSEQFT KSIDKMDSID QIMGFVMPYI
PVKLAEKQRL LELASVRERY LLFLHILTKH KENINLQIEM AKKVTDKISK SNREAMLREQ
LKVIQEELNE GDDSASGDAA YREKIENSTM PDEVKKKAFS ELKKLETGGS HNPEAPGIRN
YLDLLLDLPW ITEEKKSIDI AEARRVLESN HNGLEKVKER IIQHLAVMKL KHEKQGSILL
LIGPPGTGKT SLGKSIADAL GRKYIRISLG GVKDEAEIRG HRRTYIGALP GRIIQGMRKA
GTKNPVFILD EVDKLSASYS GDPASALLEV LDPEQNSTFS DHYLEIPYDL SDVLFIATAN
SMANIPWPLL DRMETIEISG YTKNEKLAIA KDHLVPCILE DHGLDAEKLK IEDEALKVII
DKYTREAGVR GLKKQLAKTA RFVSEKIVSG KADLPYVVRA DMLKEILGKE IIRQEEARKE
NVPGVVTGLA WTPVGGDILF IEGTFMPGSG KLTLTGQLGD VMKESAKISL SLVRSRLANT
ANSFDFTSSD IHIHVPSGAT PKDGPSAGVT LFTALTSLII GKAVDPKLAM TGEITLSGAV
LPVGGIKEKV LAAHRAGIKK IILPKENERD LEDVPEDARN ELQFVPVETI EEVLREALDI
DLPRPVVPSS YPGSSYAPAH SV