Gene Mbar_A2548 details

Gene Information

• Locus tag: Mbar_A2548
• ID: 3627160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosarcina barkeri str. Fusaro
• Kingdom: Archaea
• Replicon accession: NC_007355
• Strand: +
• Start bp: 3217008
• End bp: 3217400
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637701410
• Product: sec-independent protein translocase, protein
• Protein accession: YP_306041
• Protein GI: 73670026
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01411] twin arginine-targeting protein translocase, TatA/E family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0910954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.655548
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATAGGCA CACAGGAATT AATAGTAATC CTTATTGTAG CTCTCTTCCT CTTTGGGCCT 
AAGAAGCTTC CTGAGCTTGC ACGATCTTTA GGAAGTGCAA TGGGGGAGTT TAAAAAAGCA 
CAGCGCGCTT CTGAGCTTGA GCTCAATCAA TTCGATGCCT ACACTCGAAA GGCTGCTAAT 
ACAGTTGCCT CTGAGGAAAA AGAGAAAGGG AAGGAGCAAA AAGAAACTCC AAGCAGCAGT 
AAAGAAGCAA AAACCGATCC AGAGCTGAAA ACCAATCCAG ACCTGAAAAC TGATACAGAG 
CTGAAAACCG ATCCAGAGCT GAAAACCGAT CCAGAGCTGA AAACCGATAC AGACCTGGAA 
GATAAGCCGG AAGCCGGAAA GTCTGTACCT TAA 

 

Protein sequence

MIGTQELIVI LIVALFLFGP KKLPELARSL GSAMGEFKKA QRASELELNQ FDAYTRKAAN 
TVASEEKEKG KEQKETPSSS KEAKTDPELK TNPDLKTDTE LKTDPELKTD PELKTDTDLE 
DKPEAGKSVP