| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2529 |
|---|
| Symbol | |
|---|
| ID | 3625624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3190138 |
|---|
| End bp | 3191151 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637701391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306022 |
|---|
| Protein GI | 73670007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0158591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0615713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAACA CTAGCTTTAC GCGGGATATT CAATTCCCGC CTTTGCCGCT TGAAGAATGG
GAAGGTACGA AGAATACGCT GCATCTGTTC CTGCAAATTG TTGGGAAGGT CAGGCTTGCG
TTGTTTCCGA AAATGAACCA CTGGTGGCAT GTGCCGTTTT ATGTTTCAGT GCGTGGACTC
ACTACCGGAC CTATTCCTTA TGAGGACATG ACTTTTGAGA TGGAATTTAA TTTTCGGGAC
AAGGAGCATG TTTTAAGGAT TGAGACCAGT GAAGGGGACT TGAAAACCGT GCCTTTAAAA
AGGCTTTCGG TTGCCGTTTT TTATGACAGA GTGTTTTCAA GTTTGGGCGA GCTTGGGATT
ATGGTGGGCA TCAGGCCTGT GCCGTATGAT ATCCCTGAGG TAAGTACCGA ACCTTTTCCA
TCCGATTACC AGCATACTGC CTATGACGAA GAATACGTGA ACCGTTTCTG GAGAATCCTT
GTGCAGGTCT GGTCTATCTT TCAGGTTTTC AGGGGCTGGT TTATAGGAAA AAGTTCGCCT
GTGCACTTTT TCTGGCATCA CGCTGACCTT GCCCTGACTC TATTTTCAGG CAGGCCTGCG
CCTGTCAAGG AAGGAGCAAA TTCTGTAGAA CTTGAGGCTT CCTCACATGA AATTATCAGC
TTCGGGTTCT GGGCTGGAGA CCAGCAGGTA AGGGAACCGG CTTTTTATGC TTATATGCAC
CCGCAGCCAG CGGGCTTCAT GAATGAGCCG CTAAGCCCAA AAGAAGCTTT CTGGAGCCAT
CAGGCCGGGC TTGCGCTTCT AAGGTATGAA GATGTCCGAA ATGCAGCAGA TTCACCGGAA
AAAGCGGTTC TAGATTTTCT TGAGAGCGTG TACCAAGCAG GAACAAAGAA GGCAAACTGG
GATATTGAGG CTCTCAGGCT TCCATCATCC GAAAAGCAAC TTAAGGAGCA AGCTCAAAAG
CAACACAAAG AATATGCGGA TATACTGGAA AAGCTGGAAA GGCCGGATAT CTGA
|
|---|
| Protein sequence | MVNTSFTRDI QFPPLPLEEW EGTKNTLHLF LQIVGKVRLA LFPKMNHWWH VPFYVSVRGL
TTGPIPYEDM TFEMEFNFRD KEHVLRIETS EGDLKTVPLK RLSVAVFYDR VFSSLGELGI
MVGIRPVPYD IPEVSTEPFP SDYQHTAYDE EYVNRFWRIL VQVWSIFQVF RGWFIGKSSP
VHFFWHHADL ALTLFSGRPA PVKEGANSVE LEASSHEIIS FGFWAGDQQV REPAFYAYMH
PQPAGFMNEP LSPKEAFWSH QAGLALLRYE DVRNAADSPE KAVLDFLESV YQAGTKKANW
DIEALRLPSS EKQLKEQAQK QHKEYADILE KLERPDI
|
|---|
| |