Gene Mbar_A2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2460 
Symbol 
ID3627975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3107457 
End bp3108302 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content45% 
IMG OID637701324 
Producthypothetical protein 
Protein accessionYP_305955 
Protein GI73669940 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.171848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0255916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACA ATCTTTTCTC CCTCTTCTCT CAACCTTTAA AACCTCCTCT TTTCGAACCC 
GGTGAGCCTC GTTTCTGGGA CGACCCACAC ATCTCGAAAA GTATGCTCGA AGCCCACCTT
AACCAAACCC ATGACGGAGC TAGCCGAAGA AATGCTGAGA TCGAAAAAAC AATCCGCCAC
CTAATAACCT CAGGATTCCT GAAAACCGGA GACCAGGTAC TTGATCTTGG CTGCGGGCCA
GGACTGTACA GCAGCAAGCT ATGTTTTGAA GGCATGAAAG TAACCGGCAT CGACCTTTCC
AGAAGGTCTA TAGACTATGC GCGGGCTCAG GCTGAAAGAG ATGGGCAGAA TATCGATTAT
ATCTATACAG ACTTTTTCAA TATCGATTAT AAAGAGACTT TTGATGCCGT TCTTCAGGTC
TATGGGGAAA TCTGTACCTT TTCCGACGAA AAACGTGACC TGCTCCTGAA CCTTGTTCAT
AGGGCACTTA AAGACAACGG AATTTTCATC TTTGACGTGT CCACTAGAGA GCTACGCATG
CGGGAAGGAC TCAAAAACAG GTGGTATTTC TCTGAAGGTG GGTTCTGGAG ACCGGGAAAG
CATCTTGTGC TGGAAGAAGG ATTTGATTAT CCGGAAAATG ATACCTGGCT AAATCAGTAT
ATAATAGTGG ATGAAGATGG GACTGTAAAG GTTTACAGGC TATGGCTGCA TGACTATTCC
TTTGAAACTA TAAGTCAGAC TCTTGAAAAT AATGGGTTTA GAGTTGAAAA GGCATGGAAC
AATCTCTCAG GAGAGCTATA CCAGAAAGGC GGGGACTGGA TAGCGATAGC TGCAAAGAAA
GTATAG
 
Protein sequence
MPHNLFSLFS QPLKPPLFEP GEPRFWDDPH ISKSMLEAHL NQTHDGASRR NAEIEKTIRH 
LITSGFLKTG DQVLDLGCGP GLYSSKLCFE GMKVTGIDLS RRSIDYARAQ AERDGQNIDY
IYTDFFNIDY KETFDAVLQV YGEICTFSDE KRDLLLNLVH RALKDNGIFI FDVSTRELRM
REGLKNRWYF SEGGFWRPGK HLVLEEGFDY PENDTWLNQY IIVDEDGTVK VYRLWLHDYS
FETISQTLEN NGFRVEKAWN NLSGELYQKG GDWIAIAAKK V