Gene Mbar_A2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2409 
Symbol 
ID3626364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3043329 
End bp3044033 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content43% 
IMG OID637701277 
Producthypothetical protein 
Protein accessionYP_305909 
Protein GI73669894 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.862876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.116796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA TAGAGAAAAA AAACTATAGA GGAGTTAACC TTCCAGGCGC CCACCTTGAA 
AAAAATAACC TTATATGGGC TAACTTTCAA GACGCTAACC TTCAGGAAGC TTATCTCATA
AAAGCTAACC TTACACAGGC TGATCTTCAA GGAGCTAACC TTTATAGAGC TGACCTTCGC
GGGGCTGACC TTCGCGGGGC TAACTTTCAA GAGGCAAACC TCCAGGAGGC TAACCTGCAA
GGAGCCGACC TCTCAAATTC TTACCTTTTA GAGGGTATAG GCACTAATCT TCAAGGAGCT
AATCTCCAGG GAGCTAATCT CCAGGGAGCT AACCTTACAA GAGCTAACCT TAAAGGGGCT
AACCTTAAAG GAGCGAACCT CCAGTTATCC AATATCCATT TGGCTAACTT GCAAGGAGCT
AATCTTCAAG GAGCTAACTT CCAGGGAGCT AATCTTTATG GAGCTAACCT TCGCAGGGCC
GACCTCCAGG CAGCTGATCT TTATGTAGCT GATCTTCAAA AGTCTGACCT TCAAGAAGCG
AACCTTCAAG AAGCAAACCT TCAGGAAGCA AACCTTCAAG GAGCTAAACT AACTAATGTG
AAAAACTTAT CATTTGACCA GCTCTCTAAA GTAAAAACCC TTCATAATGC AAAATTAGAT
GAAGAAAATT TCCTGCTACT TAATGAGCAA TACATTACCG CTTGA
 
Protein sequence
MNIIEKKNYR GVNLPGAHLE KNNLIWANFQ DANLQEAYLI KANLTQADLQ GANLYRADLR 
GADLRGANFQ EANLQEANLQ GADLSNSYLL EGIGTNLQGA NLQGANLQGA NLTRANLKGA
NLKGANLQLS NIHLANLQGA NLQGANFQGA NLYGANLRRA DLQAADLYVA DLQKSDLQEA
NLQEANLQEA NLQGAKLTNV KNLSFDQLSK VKTLHNAKLD EENFLLLNEQ YITA