Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2371 |
Symbol | |
ID | 3624358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2994050 |
End bp | 2995078 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637701240 |
Product | hypothetical protein |
Protein accession | YP_305872 |
Protein GI | 73669857 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00419392 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.299083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACTG ATGGTAGTTA TACAAATAAC AAGGAAAACC AGGATTATTT AGACCGGTTT AATATTCCCT CAGAAGTTAA GGAAGCAATA AAACAGTTTC ATGAAGACAT TATAAATAAT GCCTCAGACA CCTTACAAGG AAATAATGAA GAAATCAAGA ATTTTAAGAG AAAAGTAAAT AATTTTTGGA AAAAGCCTCT GGACTTACTG GATTTACTTT TGATATATTC GCGGCAAATG GGGTCGAAAT TCAATAACGA AATGAGGGCT ATCGCTGAAA AGGAAAATGA CTACGTTTTT TTGGCATTAA TCAGACTTCA TGCCAAAGGT TGCCTTGTTA GTCAAGAAAT TGTCACATTA ATGAAGCATG GATATGCTTC TGGTGCAGAT GCTCGATGGC GCACTCTTCA CGAAATCGCA GTTACTGCGT TGTTCATTAA AGAACATGAT AATGAGGTTG CAGAGAGGTA CCTTAATTAT AGAGGTATAG AAACTTATTA TGCGACGGTA CAATACAAAA AATATGCAGC AAAACTGCAT TATGAACCAC TGCAAAAAGA TGAAGAAGAA AACGCCATCA ATTTAAAAAA TTCTCTTATT AAAAAGTATG GAAAATCTTT TGAGCATCTC TATGGATGGG CTTCAAAAGA GCTCAACAAA CCTAGGCCAA AGTTTACTGA TATTGAAAAA GCTGTTGGTA GTGAACACAT GCGTCCGTAC TATAAGATGG CTAGTAATGC TGTTCATGCA GAGCCAAATG GAACTTTTTT CAACATAGGA CTATCTAAAG CAGATGAAGA AAAAATTTTA CTTGCAGGAC CAAGTGATTC AGGGTTAGCT GATCCAGGTT CAGGTACTGC TGTGTCACTA AATTTAATTA ATGCAATTCT AATAACTTCA AGACCAACTG CAGAAAACTT AATTATTTTG CAGGCAACAT CGATGTTAGT AAATGAAATT AACGAGGCTT TTCTTGAAGC ACATAAATTT ATTGAAGAGC AGACTAAGGG GAAAGCTCTG CCTATATAA
|
Protein sequence | MKTDGSYTNN KENQDYLDRF NIPSEVKEAI KQFHEDIINN ASDTLQGNNE EIKNFKRKVN NFWKKPLDLL DLLLIYSRQM GSKFNNEMRA IAEKENDYVF LALIRLHAKG CLVSQEIVTL MKHGYASGAD ARWRTLHEIA VTALFIKEHD NEVAERYLNY RGIETYYATV QYKKYAAKLH YEPLQKDEEE NAINLKNSLI KKYGKSFEHL YGWASKELNK PRPKFTDIEK AVGSEHMRPY YKMASNAVHA EPNGTFFNIG LSKADEEKIL LAGPSDSGLA DPGSGTAVSL NLINAILITS RPTAENLIIL QATSMLVNEI NEAFLEAHKF IEEQTKGKAL PI
|
| |