Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2347 |
Symbol | |
ID | 3625332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2974483 |
End bp | 2974833 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701217 |
Product | nitrogen regulatory protein P-II |
Protein accession | YP_305849 |
Protein GI | 73669834 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0347] Nitrogen regulatory protein PII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000160523 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.064665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA TAATCGCGAT GATAAGACCA GAAAAGCTTG ACAGTGTCAA AAAAGAGATC CAGAAAATTG GAGCACACGG GCTGACAGTA TCATCTATTT CTGGATATGG TGCCCAAGGA GGACATCTGA ATGTTGATAG AACTAAAACT GAAAAATACG AAGCAAACCT GCTTGATAAA GTAAAGATTG AAATTGCGGT GAAAGATGAG TTTCTACAAA CTACAGTTGA AGCAATCGAA AGAGGATCAA AAGATGTAGA CGGCTATATA GGAAGCGGCA AGATATTTGT GCTACCACTG GAGAATGTAA TGAGAATCCG CACGAAAGAA ACTGGAAACG ACGCTCTTTG A
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Protein sequence | MKYIIAMIRP EKLDSVKKEI QKIGAHGLTV SSISGYGAQG GHLNVDRTKT EKYEANLLDK VKIEIAVKDE FLQTTVEAIE RGSKDVDGYI GSGKIFVLPL ENVMRIRTKE TGNDAL
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