Gene Mbar_A2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2264 
Symbol 
ID3624915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2873829 
End bp2874917 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content40% 
IMG OID637701137 
Productiron(III) ABC transporter, solute-binding protein 
Protein accessionYP_305769 
Protein GI73669754 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0217447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.506008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA GAGGTATAGT GGCTATTGTT ACGGTTATTG CAATCCTTGC AATAGTATCT 
GCCGTTACAC ATGTAGGTCA TAGTAACACA AAGGCTGATC AAGGTAGTGA GATAGGATCT
GATAAATACG TTCAGATAAC AGATCAAGAG GGACGAGTTG TAACTATACC AGCAAATGTG
ACTCATGTCG CTGCTCTTGC TGGTCAATCA TATGAAAAAT TAATTTTGCT AAATCAAACA
GACAAAATGG CAGTGACAAT ACGTGTGTCC AACGATTTCC CATGGGCCTA TAAGGTAGCT
CCGCAGTTGA GAAATATTCC AATGAATGGA AATCAGCAAA ATCCTAATGT TGAAGATCTC
ATAAGCAAAA AAGTACAGGT AGTATTTTGC CTGGATTTTA CAAGGGATAA ATTAAATTCG
AGTAATATTC CTGTTGTGGT CACTCAGAAA AACTCAGGAA ATCCTGAGAA TGTAGACTCT
TTCGTAAAAT ATGTGAAGCA GGAAATAGCG CTTTATGGTG AAGTAATGGG CCCGGATGCA
AAAAAGACTG CTGACGAATG GGGTGTATAT TTCGATCGGA AGGCAAATTA TGTGACATCG
AGAACTGCAA ACCTCACAGA TAGTCAGCGC CCAACAGTAT ACTATGCCAT AGATGCAATG
ACAAATCAGG GTAAAAACTC TTATCCGCAG TTTTATGTGG AGATGGCTGG CGGCAAATAT
ATTTCTGGAG ATACAGAAGG GATTGAAACA ATTACACCGG AGCAGCTACT TGTATGGAAT
CCTGATGTGA TCTATGTAGG TCATGTTAAC AGTACAGATA TATTTGCTAA TGACTCCAAG
TTCATTAATT TGAAGGCTGT ACAGAATAAC AAGGTATATC TCTGCCCGCA GGGAGTAGCC
TGGTGGGATT ATGGTGCTGA AGGAGTGTTG CTTATGGAGT ATTTTGCTAA AACATTGCAT
CCTGATTTGT TCCAGGATTT GAACATGACC AATGAGGTCA AAGATTACTA TTCGAGGTTC
TACCACTACA ACCTGACAGA TGACGAGGCA AACAGGATAC TGCAGCATTT GCCGCCTGCC
AACACTTAA
 
Protein sequence
MDKRGIVAIV TVIAILAIVS AVTHVGHSNT KADQGSEIGS DKYVQITDQE GRVVTIPANV 
THVAALAGQS YEKLILLNQT DKMAVTIRVS NDFPWAYKVA PQLRNIPMNG NQQNPNVEDL
ISKKVQVVFC LDFTRDKLNS SNIPVVVTQK NSGNPENVDS FVKYVKQEIA LYGEVMGPDA
KKTADEWGVY FDRKANYVTS RTANLTDSQR PTVYYAIDAM TNQGKNSYPQ FYVEMAGGKY
ISGDTEGIET ITPEQLLVWN PDVIYVGHVN STDIFANDSK FINLKAVQNN KVYLCPQGVA
WWDYGAEGVL LMEYFAKTLH PDLFQDLNMT NEVKDYYSRF YHYNLTDDEA NRILQHLPPA
NT