| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2257 |
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| Symbol | |
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| ID | 3624908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2865298 |
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| End bp | 2866764 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637701130 |
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| Product | asparagine synthetase (glutamine-hydrolyzing) |
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| Protein accession | YP_305762 |
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| Protein GI | 73669747 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00601101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCGGAA TAGCAGGAGC AGCAGGAACT CCTGATACAA ATGAAGAAGT AAAAAGAATG
CTTGCAGCCC TGGGGCACAG AGGGCCCGAT GCTTGCGGAA CCTATCAGGC CAAAGGACTG
AGTATAGGAA ATACTCTGCT TAAAATCACA GGCGACATGC TCCAGCCTCT GGTTGGAAAA
GGAGCTCTGG TACTCAATGG AGAAATTTTC AATTTCAGGG AACTTGCAGC CGAACAGGGT
ATAAAAACCA ATTCAGACAC TGAAGTACTT TTTGCTCTCA TAGAAACAAA GATAAAGGAA
GGAGAAACGC CTACAAATGC GATTTTTTCT GTACTTTCCA GAGTAAATGG AGATTACGCT
CTGGCCTATG TCCTGGGTAA CAAACTTGTA CTCGCTAGAG ACCCTGTAGG AGTCAAACCT
CTGTTTTATT CCCTGGAAAA GGAAGGAAAA AAACCTAAAC TCGCTTTTGC CTCCGAAAAA
AAAGCTTTTT CCAGCCAAAA GGACCAGATA AAATCTTTTC CGCCTGGCAG AGTTATGGCT
TTCGATATCA GAAATGGAAG GCTTGAAGAA AAATCCCTTA CAATTGATCC TCCGCAAGAA
AGAATCTCAG AAGAACACGA AGCCTCTTCC CGCCTAAAGG CGGCTCTTGA AAAAGCTGTA
GAGATAAGGC TTACAAAAAC TTCAGGAATT GCGTTTTCAG GAGGAATTGA CAGTACCTTT
TTAGCTGCCC TTGCAAAAAA CATTGATCCC TCAATTTCCC TTTATGCTGT CGGGCTTCCT
GATTCCCATG ACCTTGTCCA GGCTCAGCGT GCGGCTGAAG TTGCTGGCAT GAGTGATTCC
CTCAAGACTC ATACCCTTTC TCCCGAAGAA ATTGAGGCTG CAATCCCGAA CGTGATCTAT
TCGACGGAAT CTACGGACCC TATGAAAATT GCAATTGGGC TTCCACTCTA TTTTGTAGCG
AAAACTGCAA AAGAAGACGG AAAACGAGTC CTTCTCACAG GTCAGGGTGC AGACGAACTT
TTTGGAGGTT ATAACAGGCA CAAGGCCCTC CTAGAGCATG GTCCTAAGGT ACTTGACAGA
GCGATCTACA CAGACCTTAA AAACATTTCA ACTATAAACC TTGAAAGGGA CGACATGGTT
ACCATGGCCA ACTCTGTAGA GCTCAGGGTG CCTTTTCTGG ATAAGGAGGT AATAAAAACA
GGGCTTGCAA TCAGCCCTGA ACTCAAAGTC CTTAAAAGAG ATAGCCTGTA TATAAGAAAA
TATATCCTGA GAAAAGCCGC AGACGGCCTG CTTCCATCGG AACTTCTCTG GAAAGAAAAG
AAAGCAATCC AGTATGGGAC AGGAGTTCAA AAGGTACTTG ACAGGCTTGC CCGCGAGGCA
GGATTTTCAA AAAGGGAAGG AAACCATATC GAGAAATACC TAAAAAAGGT TGCTGAAAAC
CAGGGGTTCG ATTTCATATT CAGGTAA
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| Protein sequence | MCGIAGAAGT PDTNEEVKRM LAALGHRGPD ACGTYQAKGL SIGNTLLKIT GDMLQPLVGK
GALVLNGEIF NFRELAAEQG IKTNSDTEVL FALIETKIKE GETPTNAIFS VLSRVNGDYA
LAYVLGNKLV LARDPVGVKP LFYSLEKEGK KPKLAFASEK KAFSSQKDQI KSFPPGRVMA
FDIRNGRLEE KSLTIDPPQE RISEEHEASS RLKAALEKAV EIRLTKTSGI AFSGGIDSTF
LAALAKNIDP SISLYAVGLP DSHDLVQAQR AAEVAGMSDS LKTHTLSPEE IEAAIPNVIY
STESTDPMKI AIGLPLYFVA KTAKEDGKRV LLTGQGADEL FGGYNRHKAL LEHGPKVLDR
AIYTDLKNIS TINLERDDMV TMANSVELRV PFLDKEVIKT GLAISPELKV LKRDSLYIRK
YILRKAADGL LPSELLWKEK KAIQYGTGVQ KVLDRLAREA GFSKREGNHI EKYLKKVAEN
QGFDFIFR
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